C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12176
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121420 Gm12176-001 ENSMUSG00000082792 10090 + 11:47541432-47542306 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartLiverPlacentaTestisENSMUST00000121420
Transcript ID Adipose Bladder Brain Breast Colon Heart Liver Placenta Testis
ENSMUST00000121420 0.041±0.00 0.002±0.00 0.305±0.11 0.051±0.00 0.076±0.00 0.041±0.00 0.018±0.00 0.134±0.08 0.032±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008CL CIL_0008CL_0002 VISTA 11:46983315-47585732

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000433054 RP11-1O7.1-001 processed_pseudogene Homo_sapiens 0 627
ENST00000436136 RP11-16L9.1-001 processed_pseudogene Homo_sapiens 0 549
ENST00000447422 RP11-109P14.8-001 processed_pseudogene Homo_sapiens 0 457
ENST00000457299 AC087163.2-001 processed_pseudogene Homo_sapiens 0 540
ENST00000468126 RP11-324J13.1-001 processed_pseudogene Homo_sapiens 0 651
ENST00000478038 RPS2P44-001 processed_pseudogene Homo_sapiens 0 538
ENST00000480705 RP11-296A18.5-001 processed_pseudogene Homo_sapiens 0 754
ENST00000488906 RP5-867C24.1-001 processed_pseudogene Homo_sapiens 0 616
ENST00000491725 RP11-810P12.1-001 processed_pseudogene Homo_sapiens 0 523
ENST00000492365 KB-1683C8.1-001 processed_pseudogene Homo_sapiens 0 636

Loading