C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008RX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs401 VISTA 9606 2:103820060-104420907
GeneTranscriptPositionBiotype
ENSG00000225765 (AC068535.3)
 ENST00000449772 (AC068535.3-001) 104412227-104414008 lincRNA
ENSG00000227157 (AC068535.2)
 ENST00000416008 (AC068535.2-001) 104411201-104415612 lincRNA
ENSG00000236141 (AC013727.2)
 ENST00000447761 (AC013727.2-001) 103865746-103869688 lincRNA
ENSG00000256637 (RP11-76I14.1)
 ENST00000412112 (RP11-76I14.1-001) 104053502-104059256 lincRNA
ENST00000537492 (RP11-76I14.1-003) 103874310-104077604 lincRNA
ENST00000544869 (RP11-76I14.1-004) 103874331-104077778 lincRNA
ENST00000545549 (RP11-76I14.1-002) 104051975-104077523 lincRNA
ENST00000609391 (RP11-76I14.1-005) 104051882-104058336 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0008RX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs401 VISTA 10090 1:41681432-42282259
GeneTranscriptPositionBiotype
ENSMUSG00000053640 (Gm9915)
predicted gene 9915 		ENSMUST00000066196 (Gm9915-201) 42229726-42231108 lincRNA
ENSMUST00000188087 (Gm9915-001) 42229727-42231108 lincRNA
ENSMUSG00000100178 (RP24-177N20.1)
predicted gene 5267 		ENSMUST00000191574 (RP24-177N20.1-001) 42103289-42104333 processed_pseudogene
ENSMUSG00000100832 (RP23-176M9.1)
predicted gene 29260 		ENSMUST00000186391 (RP23-176M9.1-001) 41781808-41939560 lincRNA
ENSMUST00000187227 (RP23-176M9.1-002) 41918352-41920085 lincRNA
ENSMUSG00000101299 (RP24-421J9.3)
predicted gene 28175 		ENSMUST00000189138 (RP24-421J9.3-001) 42261855-42262253 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008RX_0001ENSG00000225765ENST00000449772ENSG00000227157ENST00000416008ENSG00000236141ENST00000447761ENSG00000256637ENST00000412112ENST00000537492ENST00000544869ENST00000545549ENST00000609391CIL_0008RX_0002ENSMUSG00000053640ENSMUST00000066196ENSMUST00000188087ENSMUSG00000100178ENSMUST00000191574ENSMUSG00000100832ENSMUST00000186391ENSMUST00000187227ENSMUSG00000101299ENSMUST00000189138
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008RX_0001ENSG00000225765ENST00000449772ENSG00000227157ENST00000416008ENSG00000236141ENST00000447761ENSG00000256637ENST00000412112ENST00000609391CIL_0008RX_0002ENSMUSG00000053640ENSMUST00000066196ENSMUST00000188087ENSMUSG00000100178ENSMUST00000191574ENSMUSG00000100832ENSMUST00000186391ENSMUST00000187227ENSMUSG00000101299ENSMUST00000189138
Gene Transcript Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000225765 ENST00000449772 N/A N/A N/A N/A N/A N/A 1.892±0.00 9.107±0.00 N/A N/A N/A N/A 0.069±0.00
ENSG00000227157 ENST00000416008 N/A N/A N/A 0.140±0.06 N/A N/A N/A N/A N/A N/A N/A N/A 0.056±0.00
ENSG00000236141 ENST00000447761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.043±0.00
ENSG00000256637 ENST00000412112 N/A 0.155±0.00 0.038±0.00 0.067±0.02 0.020±0.00 0.024±0.01 0.049±0.00 N/A 0.062±0.00 0.006±0.00 0.008±0.00 0.008±0.00 0.041±0.01
ENST00000537492 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545549 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609391 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.026±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000053640 ENSMUST00000066196 N/A N/A N/A 0.035±0.02 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188087 N/A N/A N/A 0.036±0.02 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000100178 ENSMUST00000191574 N/A N/A N/A 0.008±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000100832 ENSMUST00000186391 0.023±0.00 N/A N/A 4.221±0.00 N/A N/A N/A 0.007±0.00 N/A N/A 0.006±0.00 N/A 0.023±0.00
ENSMUST00000187227 N/A N/A N/A 0.064±0.00 N/A N/A N/A N/A N/A N/A 0.050±0.00 N/A N/A
ENSMUSG00000101299 ENSMUST00000189138 N/A N/A N/A 0.380±0.00 N/A N/A N/A N/A N/A N/A 0.570±0.02 0.022±0.00 N/A

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