C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: predicted gene 5267
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000191574 RP24-177N20.1-001 ENSMUSG00000100178 10090 + 1:42103289-42104333 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENSMUST00000191574
Transcript ID Brain
ENSMUST00000191574 0.008±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004IW CIL_0004IW_0003 CGP 1:40805601-42703176
CIL_0007JQ CIL_0007JQ_0002 UCNEbase 1:40943211-42889148
CIL_0008FR CIL_0008FR_0002 VISTA 1:41510882-42111922
CIL_00081S CIL_00081S_0002 VISTA 1:41511796-42112968
CIL_00099U CIL_00099U_0002 VISTA 1:41512941-42115356
CIL_0008HX CIL_0008HX_0002 VISTA 1:41596304-42198180
CIL_0008LT CIL_0008LT_0002 VISTA 1:41617498-42220605
CIL_0008L0 CIL_0008L0_0002 VISTA 1:41635261-42237041
CIL_0008RX CIL_0008RX_0002 VISTA 1:41681432-42282259
CIL_0008G0 CIL_0008G0_0002 VISTA 1:41942415-42544647
CIL_00091Z CIL_00091Z_0002 VISTA 1:41955267-42558543
CIL_0008P4 CIL_0008P4_0002 VISTA 1:41958657-42559850
CIL_0007T8 CIL_0007T8_0002 VISTA 1:42065768-42666767

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000392524 HNRNPA3-001 protein_coding Homo_sapiens 0 1234
ENST00000401429 HNRNPA3P1-001 processed_pseudogene Homo_sapiens 0 1098
ENST00000411529 HNRNPA3-002 protein_coding Homo_sapiens 0 1232
ENST00000416838 HNRNPA3P3-001 processed_pseudogene Homo_sapiens 0 1062
ENST00000424470 HNRNPA3P15-001 processed_pseudogene Homo_sapiens 0 785
ENST00000424736 RP11-512F24.1-001 processed_pseudogene Homo_sapiens 0 821
ENST00000427514 HNRNPA3P4-001 processed_pseudogene Homo_sapiens 0 804
ENST00000432457 HNRNPA3-008 protein_coding Homo_sapiens 0 191
ENST00000435711 HNRNPA3-014 protein_coding Homo_sapiens 0 1234
ENST00000437410 HNRNPA3P12-001 processed_pseudogene Homo_sapiens 0 1029
ENST00000441511 AC012513.4-001 processed_pseudogene Homo_sapiens 0 728
ENST00000444546 HNRNPA3P14-001 processed_pseudogene Homo_sapiens 0 462
ENST00000451198 HNRNPA3P2-001 unprocessed_pseudogene Homo_sapiens 0 370
ENST00000455201 HNRNPA3P5-001 processed_pseudogene Homo_sapiens 0 874
ENST00000472163 HNRNPA3P6-001 processed_pseudogene Homo_sapiens 0 830
ENST00000483137 HNRNPA3-012 retained_intron Homo_sapiens 8e-32 141
ENST00000512222 HNRNPA3P13-001 processed_pseudogene Homo_sapiens 0 913
ENST00000547726 HNRNPA3P10-001 processed_pseudogene Homo_sapiens 0 1064

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