C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008TB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1424 VISTA 9606 8:75928875-76530889
GeneTranscriptPositionBiotype
ENSG00000253661 (ZFHX4-AS1)
ZFHX4 antisense RNA 1 		ENST00000518143 (ZFHX4-AS1-001) 76610881-76683278 antisense
ENST00000521894 (ZFHX4-AS1-003) 76611376-76615321 antisense
ENST00000522357 (ZFHX4-AS1-004) 76611674-76615028 antisense
ENST00000522961 (ZFHX4-AS1-005) 76491200-76683156 antisense
ENST00000523977 (ZFHX4-AS1-002) 76615192-76616441 antisense
ENSG00000254300 (LINC01111)
long intergenic non-protein coding RNA 1111 		ENST00000518732 (LINC01111-001) 76406654-76524356 lincRNA
ENSG00000270866 (RP11-706J10.2)
 ENST00000603284 (RP11-706J10.2-001) 76403998-76405091 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0008TB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1424 VISTA 10090 3:4294085-4896058
GeneTranscriptPositionBiotype
ENSMUSG00000077995 (Gm23937)
predicted gene, 23937 		ENSMUST00000104802 (Gm23937-201) 4355004-4355096 miRNA
ENSMUSG00000096480 (Gm23976)
predicted gene, 23976 		ENSMUST00000175001 (Gm23976-201) 4305193-4305293 miRNA
ENSMUSG00000098659 (1110015O18Rik)
RIKEN cDNA 1110015O18 gene 		ENSMUST00000183632 (1110015O18Rik-002) 4799493-4813975 lincRNA
ENSMUST00000183944 (1110015O18Rik-001) 4798708-4814911 lincRNA
ENSMUST00000184429 (1110015O18Rik-003) 4797558-4798821 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisCIL_0008TB_0001ENSG00000253661ENST00000518143ENST00000521894ENST00000522357ENST00000522961ENST00000523977ENSG00000254300ENST00000518732ENSG00000270866ENST00000603284CIL_0008TB_0002ENSMUSG00000077995ENSMUST00000104802ENSMUSG00000096480ENSMUST00000175001ENSMUSG00000098659ENSMUST00000183632ENSMUST00000183944ENSMUST00000184429
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisCIL_0008TB_0001ENSG00000253661ENST00000518143ENST00000521894ENST00000522961ENST00000523977ENSG00000254300ENST00000518732ENSG00000270866ENST00000603284CIL_0008TB_0002ENSMUSG00000077995ENSMUST00000104802ENSMUSG00000096480ENSMUST00000175001ENSMUSG00000098659ENSMUST00000183632ENSMUST00000183944ENSMUST00000184429
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSG00000253661 ENST00000518143 0.152±0.00 0.006±0.00 N/A 0.548±0.30 0.199±0.09 0.114±0.06 N/A N/A N/A 0.135±0.00 0.039±0.00 N/A 0.098±0.02
ENST00000521894 N/A N/A N/A 0.258±0.00 0.116±0.00 N/A 0.066±0.00 N/A 0.066±0.00 N/A N/A N/A N/A
ENST00000522357 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522961 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.740±0.00
ENST00000523977 N/A N/A N/A N/A 1.265±0.00 N/A N/A N/A N/A N/A N/A N/A 0.190±0.07
ENSG00000254300 ENST00000518732 N/A 0.083±0.00 N/A N/A N/A 0.027±0.00 0.015±0.00 0.015±0.00 N/A N/A N/A N/A 0.005±0.00
ENSG00000270866 ENST00000603284 N/A N/A N/A 2.333±0.97 N/A 0.109±0.00 N/A N/A N/A 0.106±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUSG00000077995 ENSMUST00000104802 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13369.509±11652.31 N/A N/A
ENSMUSG00000096480 ENSMUST00000175001 N/A N/A N/A 43.572±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000098659 ENSMUST00000183632 N/A N/A 0.034±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183944 N/A N/A 0.005±0.00 0.184±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000184429 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.016±0.00 N/A

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