C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008VE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs353 VISTA 9606 14:97112851-97713734
GeneTranscriptPositionBiotype
ENSG00000197176 (RP11-76E12.1)
 ENST00000355909 (RP11-76E12.1-001) 97632647-97686658 lincRNA
ENST00000554197 (RP11-76E12.1-002) 97646047-97686658 lincRNA
ENST00000556163 (RP11-76E12.1-003) 97633344-97686627 lincRNA
ENSG00000246084 (CTD-2506J14.1)
 ENST00000499910 (CTD-2506J14.1-001) 97458870-97464159 lincRNA
ENST00000554260 (CTD-2506J14.1-002) 97458831-97469385 lincRNA
ENST00000554862 (CTD-2506J14.1-003) 97458816-97581601 lincRNA
ENSG00000259110 (RP11-359N5.1)
 ENST00000554445 (RP11-359N5.1-001) 97154857-97158736 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0008VE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs353 VISTA 10090 12:106179344-106780241
GeneTranscriptPositionBiotype
ENSMUSG00000085820 (4933406K04Rik)
RIKEN cDNA 4933406K04 gene 		ENSMUST00000124068 (4933406K04Rik-003) 106701159-106716333 lincRNA
ENSMUST00000124363 (4933406K04Rik-004) 106695716-106716324 lincRNA
ENSMUST00000135423 (4933406K04Rik-001) 106685607-106716362 lincRNA
ENSMUST00000149382 (4933406K04Rik-002) 106706049-106716362 lincRNA
ENSMUSG00000091442 (Gm17031)
predicted gene 17031 		ENSMUST00000016698 (Gm17031-001) 106508242-106509910 processed_pseudogene
ENSMUSG00000091583 (Gm17033)
predicted gene 17033 		ENSMUST00000146663 (Gm17033-001) 106558750-106574924 lincRNA
ENSMUSG00000091762 (Gm3191)
predicted gene 3191 		ENSMUST00000167139 (Gm3191-001) 106459150-106459495 processed_pseudogene
ENSMUSG00000092066 (1700121N20Rik)
RIKEN cDNA 1700121N20 gene 		ENSMUST00000167922 (1700121N20Rik-001) 106442653-106447666 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdrenalBrainBreastHeartKidneyLungPlacentaTestisCIL_0008VE_0001ENSG00000197176ENST00000355909ENST00000554197ENST00000556163ENSG00000246084ENST00000499910ENST00000554260ENST00000554862ENSG00000259110ENST00000554445CIL_0008VE_0002ENSMUSG00000085820ENSMUST00000124068ENSMUST00000124363ENSMUST00000135423ENSMUST00000149382ENSMUSG00000091442ENSMUST00000016698ENSMUSG00000091583ENSMUST00000146663ENSMUSG00000091762ENSMUST00000167139ENSMUSG00000092066ENSMUST00000167922
Region; Gene Transcript'; AdrenalBrainBreastHeartKidneyLungPlacentaTestisCIL_0008VE_0001ENSG00000197176ENST00000355909ENST00000554197ENST00000556163ENSG00000246084ENST00000499910ENST00000554260ENST00000554862ENSG00000259110ENST00000554445CIL_0008VE_0002ENSMUSG00000085820ENSMUST00000124068ENSMUST00000124363ENSMUST00000135423ENSMUST00000149382ENSMUSG00000091442ENSMUST00000016698ENSMUSG00000091583ENSMUST00000146663ENSMUSG00000091762ENSMUST00000167139ENSMUSG00000092066ENSMUST00000167922
Gene Transcript Adrenal Brain Breast Heart Kidney Lung Placenta Testis
ENSG00000197176 ENST00000355909 0.009±0.00 N/A N/A N/A 0.006±0.00 0.023±0.00 0.345±0.37 0.063±0.00
ENST00000554197 N/A N/A N/A N/A N/A N/A 0.566±0.00 0.016±0.00
ENST00000556163 0.109±0.00 N/A N/A N/A N/A N/A 0.051±0.00 N/A
ENSG00000246084 ENST00000499910 0.163±0.00 N/A N/A N/A N/A 0.054±0.00 0.091±0.00 0.032±0.00
ENST00000554260 N/A 0.027±0.00 0.187±0.00 N/A 0.113±0.00 N/A 0.152±0.00 0.066±0.00
ENST00000554862 0.149±0.00 N/A N/A N/A N/A N/A N/A 0.093±0.05
ENSG00000259110 ENST00000554445 N/A N/A N/A N/A N/A N/A N/A 0.145±0.11
Gene Transcript Adrenal Brain Breast Heart Kidney Lung Placenta Testis
ENSMUSG00000085820 ENSMUST00000124068 N/A N/A 0.039±0.00 N/A N/A N/A N/A 4.500±0.00
ENSMUST00000124363 N/A 0.015±0.01 0.085±0.00 0.030±0.00 N/A N/A N/A 6.619±0.84
ENSMUST00000135423 N/A N/A N/A N/A 0.026±0.00 N/A N/A N/A
ENSMUST00000149382 N/A N/A N/A 0.085±0.03 N/A N/A N/A 25.373±5.66
ENSMUSG00000091442 ENSMUST00000016698 N/A 0.004±0.00 N/A N/A N/A N/A 0.009±0.00 N/A
ENSMUSG00000091583 ENSMUST00000146663 N/A 0.069±0.01 N/A N/A N/A N/A N/A 0.196±0.16
ENSMUSG00000091762 ENSMUST00000167139 N/A 0.153±0.11 N/A N/A N/A N/A N/A 1.794±2.27
ENSMUSG00000092066 ENSMUST00000167922 N/A 0.020±0.01 N/A N/A N/A N/A 0.008±0.00 2.520±1.22

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