C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008WU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs980 VISTA 9606 12:17395177-17996413
GeneTranscriptPositionBiotype
ENSG00000256389 (RP11-606D9.1)
 ENST00000539105 (RP11-606D9.1-001) 17589257-17615463 lincRNA
ENSG00000256756 (TIMM17BP1)
translocase of inner mitochondrial membrane 17 homolog B (yeast) pseudogene 1 		ENST00000545713 (TIMM17BP1-001) 17400399-17400914 processed_pseudogene
ENSG00000256994 (RP11-871F6.3)
 ENST00000540399 (RP11-871F6.3-001) 17509353-17589992 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0008WU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs980 VISTA 10090 6:138993287-139594551
GeneTranscriptPositionBiotype
ENSMUSG00000030228 (Pik3c2g)
phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide 		ENSMUST00000032353 (Pik3c2g-201) 139621888-139635740 protein_coding
ENSMUST00000087657 (Pik3c2g-202) 139843648-139969284 protein_coding
ENSMUST00000111868 (Pik3c2g-001) 139715861-139969284 protein_coding
ENSMUST00000185968 (Pik3c2g-006) 139614071-139657231 protein_coding
ENSMUST00000186585 (Pik3c2g-011) 139599483-139657231 processed_transcript
ENSMUST00000187069 (Pik3c2g-010) 139715861-139851532 processed_transcript
ENSMUST00000187223 (Pik3c2g-003) 139841503-139861755 protein_coding
ENSMUST00000187448 (Pik3c2g-009) 139841581-139900069 processed_transcript
ENSMUST00000187618 (Pik3c2g-005) 139599480-139636074 protein_coding
ENSMUST00000188066 (Pik3c2g-007) 139587221-139622487 protein_coding
ENSMUST00000189374 (Pik3c2g-002) 139841445-139969284 protein_coding
ENSMUST00000190962 (Pik3c2g-004) 139587237-139636536 protein_coding
ENSMUST00000191013 (Pik3c2g-008) 139772442-139846515 retained_intron
ENSMUST00000191591 (Pik3c2g-012) 139917983-139942280 processed_transcript
ENSMUSG00000092164 (Rergl)
RERG/RAS-like 		ENSMUST00000170650 (Rergl-201) 139493182-139501909 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008WU_0001ENSG00000256389ENST00000539105ENSG00000256756ENST00000545713ENSG00000256994ENST00000540399CIL_0008WU_0002ENSMUSG00000030228ENSMUST00000032353ENSMUST00000087657ENSMUST00000111868ENSMUST00000185968ENSMUST00000186585ENSMUST00000187069ENSMUST00000187223ENSMUST00000187448ENSMUST00000187618ENSMUST00000188066ENSMUST00000189374ENSMUST00000190962ENSMUST00000191013ENSMUST00000191591ENSMUSG00000092164ENSMUST00000170650
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008WU_0001ENSG00000256389ENST00000539105ENSG00000256756ENST00000545713ENSG00000256994ENST00000540399CIL_0008WU_0002ENSMUSG00000030228ENSMUST00000032353ENSMUST00000087657ENSMUST00000111868ENSMUST00000185968ENSMUST00000186585ENSMUST00000187069ENSMUST00000187223ENSMUST00000187448ENSMUST00000187618ENSMUST00000188066ENSMUST00000189374ENSMUST00000190962ENSMUST00000191013ENSMUST00000191591ENSMUSG00000092164ENSMUST00000170650
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000256389 ENST00000539105 N/A N/A N/A N/A 0.022±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.682±0.10
ENSG00000256756 ENST00000545713 0.044±0.00 0.047±0.00 N/A 0.057±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000256994 ENST00000540399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.045±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030228 ENSMUST00000032353 N/A N/A N/A 0.019±0.00 0.090±0.02 0.152±0.00 N/A 0.454±0.12 0.387±0.19 0.134±0.12 N/A 0.358±0.00 0.048±0.01 0.045±0.02
ENSMUST00000087657 0.070±0.06 2.871±1.10 0.015±0.00 0.007±0.00 0.323±0.08 0.093±0.03 0.033±0.02 N/A N/A 0.108±0.00 0.016±0.01 1.193±0.76 0.042±0.00 0.041±0.00
ENSMUST00000111868 0.366±0.00 N/A 0.005±0.00 0.028±0.01 0.180±0.08 0.144±0.10 N/A 2.793±0.55 1.970±1.68 0.248±0.08 N/A 0.225±0.09 0.041±0.02 0.115±0.06
ENSMUST00000185968 N/A N/A N/A N/A N/A 0.106±0.01 N/A 0.344±0.13 0.462±0.17 N/A N/A N/A N/A N/A
ENSMUST00000186585 N/A N/A N/A N/A N/A N/A N/A N/A 0.372±0.35 N/A N/A N/A N/A N/A
ENSMUST00000187069 N/A N/A 0.004±0.00 0.024±0.00 0.249±0.00 0.274±0.11 0.020±0.00 N/A 0.161±0.00 0.257±0.08 N/A N/A 0.043±0.02 0.142±0.08
ENSMUST00000187223 N/A 2.568±0.94 N/A 0.011±0.00 0.131±0.05 N/A 0.013±0.00 N/A N/A 0.074±0.00 0.010±0.00 0.506±0.17 0.007±0.00 N/A
ENSMUST00000187448 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.514±0.18 0.019±0.00 0.060±0.00
ENSMUST00000187618 N/A N/A N/A N/A N/A N/A N/A N/A 0.297±0.00 N/A N/A N/A N/A 0.071±0.03
ENSMUST00000188066 0.070±0.00 N/A N/A N/A 0.105±0.03 0.146±0.05 N/A 0.939±0.26 0.832±0.51 0.242±0.08 N/A 0.179±0.13 0.107±0.08 0.028±0.00
ENSMUST00000189374 0.160±0.11 1.166±0.14 N/A N/A 0.192±0.08 N/A N/A N/A N/A N/A N/A 0.507±0.12 N/A N/A
ENSMUST00000190962 N/A N/A 0.003±0.00 N/A N/A N/A N/A 0.171±0.00 0.196±0.04 N/A N/A N/A N/A N/A
ENSMUST00000191013 N/A N/A N/A N/A N/A 0.053±0.00 N/A N/A N/A N/A N/A 0.284±0.00 N/A N/A
ENSMUST00000191591 N/A N/A N/A N/A 2.921±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000092164 ENSMUST00000170650 0.688±0.18 N/A 0.471±0.35 N/A 0.138±0.07 0.141±0.01 N/A 0.942±0.29 N/A N/A 0.136±0.04 0.561±0.26 0.047±0.00 0.187±0.07

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