C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RERG/RAS-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000170650 Rergl-201 ENSMUSG00000092164 10090 - 6:139493182-139501909 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonKidneyMuscleOvaryPlacentaTestisENSMUST00000170650
Transcript ID Adipose Bladder Breast Colon Kidney Muscle Ovary Placenta Testis
ENSMUST00000170650 0.688±0.18 0.471±0.35 0.138±0.07 0.141±0.01 0.942±0.29 0.136±0.04 0.561±0.26 0.047±0.00 0.187±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SJ CIL_0008SJ_0002 VISTA 6:138978532-139580000
CIL_0008WU CIL_0008WU_0002 VISTA 6:138993287-139594551
CIL_0008A8 CIL_0008A8_0002 VISTA 6:139175726-139776681
CIL_0005FJ CIL_0005FJ_0002 CGP 6:139493182-139969284

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005525 IEA GTP binding
GO:0005575 ND cellular_component
GO:0006184 IEA GTP catabolic process
GO:0007264 IEA small GTPase mediated signal transduction
GO:0008150 ND biological_process
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229002 RERGL-001 protein_coding Homo_sapiens 0 610
ENST00000536890 RERGL-003 protein_coding Homo_sapiens 1e-38 163
ENST00000538724 RERGL-002 protein_coding Homo_sapiens 0 660
ENST00000540148 RERGL-004 processed_transcript Homo_sapiens 0 553
ENST00000541632 RERGL-005 processed_transcript Homo_sapiens 0 411

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