C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008XE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm451 VISTA 9606 12:22692994-23294708
GeneTranscriptPositionBiotype
ENSG00000115934 (RP11-153K16.2)
 ENST00000538297 (RP11-153K16.2-001) 23181334-23251499 lincRNA
ENSG00000241451 (RPS27P22)
ribosomal protein S27 pseudogene 22 		ENST00000478056 (RPS27P22-001) 22722229-22722469 processed_pseudogene
ENSG00000256321 (RP11-153K16.1)
 ENST00000534841 (RP11-153K16.1-003) 23175642-23188519 lincRNA
ENST00000541288 (RP11-153K16.1-001) 23099368-23188538 lincRNA
ENST00000545400 (RP11-153K16.1-002) 23175648-23191587 lincRNA
ENSG00000256923 (RP11-449P1.1)
 ENST00000537293 (RP11-449P1.1-001) 22742582-22743091 lincRNA
ENSG00000256995 (RP11-114G22.1)
 ENST00000413794 (RP11-114G22.1-001) 22699859-22888043 lincRNA
ENST00000536744 (RP11-114G22.1-002) 22699941-22888933 lincRNA
ENST00000538317 (RP11-114G22.1-003) 22859475-22971008 lincRNA
ENST00000540895 (RP11-114G22.1-004) 22964572-23174123 lincRNA
ENST00000540994 (RP11-114G22.1-005) 23021787-23054241 lincRNA
ENST00000590328 (RP11-114G22.1-006) 22787043-22888021 lincRNA
ENST00000590955 (RP11-114G22.1-008) 22859165-22888021 lincRNA
ENST00000593117 (RP11-114G22.1-007) 22859531-22888021 lincRNA
CIL_0008XE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm451 VISTA 10090 6:143137339-143739026
GeneTranscriptPositionBiotype
ENSMUSG00000030275 (Etnk1)
ethanolamine kinase 1 		ENSMUST00000032413 (Etnk1-201) 143167230-143208542 protein_coding
ENSMUSG00000072679 (D6Ertd474e)
DNA segment, Chr 6, ERATO Doi 474, expressed 		ENSMUST00000100817 (D6Ertd474e-001) 143245893-143297272 lincRNA
ENSMUST00000159793 (D6Ertd474e-005) 143245888-143249112 lincRNA
ENSMUST00000160188 (D6Ertd474e-004) 143245888-143295708 lincRNA
ENSMUST00000160951 (D6Ertd474e-002) 143286050-143296037 lincRNA
ENSMUST00000161174 (D6Ertd474e-003) 143245893-143296073 lincRNA
ENSMUSG00000084971 (4930579D09Rik)
RIKEN cDNA 4930579D09 gene 		ENSMUST00000132321 (4930579D09Rik-001) 143533965-143535508 lincRNA
ENSMUSG00000086887 (1700060C16Rik)
RIKEN cDNA 1700060C16 gene 		ENSMUST00000150559 (1700060C16Rik-001) 143593353-143651288 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008XE_0001ENSG00000115934ENST00000538297ENSG00000241451ENST00000478056ENSG00000256321ENST00000534841ENST00000541288ENST00000545400ENSG00000256923ENST00000537293ENSG00000256995ENST00000413794ENST00000536744ENST00000538317ENST00000540895ENST00000540994ENST00000590328ENST00000590955ENST00000593117CIL_0008XE_0002ENSMUSG00000030275ENSMUST00000032413ENSMUSG00000072679ENSMUST00000100817ENSMUST00000159793ENSMUST00000160188ENSMUST00000160951ENSMUST00000161174ENSMUSG00000084971ENSMUST00000132321ENSMUSG00000086887ENSMUST00000150559
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008XE_0001ENSG00000115934ENST00000538297ENSG00000241451ENST00000478056ENSG00000256321ENST00000534841ENST00000541288ENST00000545400ENSG00000256923ENST00000537293ENSG00000256995ENST00000413794ENST00000538317ENST00000540895ENST00000540994ENST00000590328CIL_0008XE_0002ENSMUSG00000030275ENSMUST00000032413ENSMUSG00000072679ENSMUST00000100817ENSMUST00000159793ENSMUST00000160188ENSMUST00000160951ENSMUST00000161174ENSMUSG00000084971ENSMUST00000132321ENSMUSG00000086887ENSMUST00000150559
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115934 ENST00000538297 0.036±0.00 0.063±0.00 N/A 0.009±0.00 0.026±0.00 0.016±0.00 N/A N/A N/A 0.015±0.00 N/A 0.009±0.00 N/A 0.036±0.01
ENSG00000241451 ENST00000478056 0.070±0.00 0.072±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000256321 ENST00000534841 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.079±0.00
ENST00000541288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.023±0.00
ENST00000545400 N/A N/A N/A 0.021±0.00 N/A N/A N/A N/A N/A N/A N/A 0.016±0.00 N/A 0.054±0.02
ENSG00000256923 ENST00000537293 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.103±0.00 N/A 0.080±0.02
ENSG00000256995 ENST00000413794 N/A N/A N/A 0.088±0.00 0.032±0.00 N/A 0.028±0.00 N/A N/A 0.029±0.00 N/A 0.057±0.01 N/A N/A
ENST00000536744 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538317 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.318±0.00
ENST00000540895 0.007±0.00 N/A N/A 0.282±0.00 N/A N/A N/A N/A N/A 0.014±0.00 N/A 0.050±0.03 N/A 0.012±0.00
ENST00000540994 0.019±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.114±0.00 0.206±0.00
ENST00000590328 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.179±0.00 N/A N/A N/A N/A
ENST00000590955 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030275 ENSMUST00000032413 18.692±4.89 53.565±9.46 14.819±4.23 27.759±7.86 19.971±10.32 22.202±3.62 7.939±0.39 50.145±6.01 9.368±3.07 29.727±1.69 3.763±0.78 41.775±19.14 7.630±3.05 24.483±9.79
ENSMUSG00000072679 ENSMUST00000100817 0.020±0.00 N/A 0.012±0.01 0.040±0.00 0.035±0.02 0.082±0.00 0.014±0.00 0.024±0.01 0.009±0.00 0.078±0.01 0.021±0.00 0.168±0.08 0.035±0.01 N/A
ENSMUST00000159793 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.819±0.00 0.127±0.00 N/A
ENSMUST00000160188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.417±0.00 0.009±0.00 N/A
ENSMUST00000160951 0.075±0.02 N/A N/A N/A N/A N/A N/A N/A 0.029±0.01 N/A 0.094±0.00 0.326±0.03 0.153±0.06 N/A
ENSMUST00000161174 N/A N/A 0.013±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.551±0.00 N/A N/A
ENSMUSG00000084971 ENSMUST00000132321 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.110±0.00 N/A N/A N/A 11.164±2.11
ENSMUSG00000086887 ENSMUST00000150559 0.110±0.00 N/A N/A N/A 0.069±0.00 N/A N/A 0.129±0.07 0.054±0.02 N/A N/A 0.090±0.00 0.037±0.03 0.620±0.17

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