C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DNA segment, Chr 6, ERATO Doi 474, expressed
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000072679 D6Ertd474e 10090 + 6:143245888-143297272 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000100817 D6Ertd474e-001 143245893-143297272 lincRNA
  ENSMUST00000159793 D6Ertd474e-005 143245888-143249112 lincRNA
  ENSMUST00000160188 D6Ertd474e-004 143245888-143295708 lincRNA
  ENSMUST00000160951 D6Ertd474e-002 143286050-143296037 lincRNA
  ENSMUST00000161174 D6Ertd474e-003 143245893-143296073 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000100817ENSMUST00000159793ENSMUST00000160188ENSMUST00000160951ENSMUST00000161174
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000100817 0.020±0.00 0.012±0.01 0.040±0.00 0.035±0.02 0.082±0.00 0.014±0.00 0.024±0.01 0.009±0.00 0.078±0.01 0.021±0.00 0.168±0.08 0.035±0.01
ENSMUST00000159793 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.819±0.00 0.127±0.00
ENSMUST00000160188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.417±0.00 0.009±0.00
ENSMUST00000160951 0.075±0.02 N/A N/A N/A N/A N/A N/A 0.029±0.01 N/A 0.094±0.00 0.326±0.03 0.153±0.06
ENSMUST00000161174 N/A 0.013±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.551±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XD CIL_0008XD_0002 VISTA 6:142997273-143598460
CIL_0008XE CIL_0008XE_0002 VISTA 6:143137339-143739026
CIL_0006Y0 CIL_0006Y0_0003 CGP 6:143167230-144781977
CIL_0008MX CIL_0008MX_0002 VISTA 6:143197298-143800849

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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