C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008YQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs900 VISTA 9606 5:2879500-3480318
GeneTranscriptPositionBiotype
ENSG00000248118 (LINC01019)
long intergenic non-protein coding RNA 1019 		ENST00000505443 (LINC01019-001) 3417152-3536094 lincRNA
ENSG00000248736 (RP11-35O7.1)
 ENST00000515086 (RP11-35O7.1-001) 2965006-2967628 lincRNA
ENSG00000249808 (LINC01377)
long intergenic non-protein coding RNA 1377 		ENST00000505396 (LINC01377-001) 3178095-3181232 lincRNA
ENSG00000249830 (RP11-121L11.3)
 ENST00000512521 (RP11-121L11.3-001) 3452816-3461660 lincRNA

Homo sapiens Ensembl (GRCh38)

Genome
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Structures from Ensembl
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CIL_0008YQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs900 VISTA 10090 13:72005068-72605867
GeneTranscriptPositionBiotype
ENSMUSG00000094989 (Rpl9-ps4)
ribosomal protein L9, pseudogene 4 		ENSMUST00000075549 (Rpl9-ps4-201) 72454762-72455340 processed_pseudogene

Mus musculus Ensembl (GRCm38)

Genome
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Genes
Structures from Ensembl
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Transcripts
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008YQ_0001ENSG00000248118ENST00000505443ENSG00000248736ENST00000515086ENSG00000249808ENST00000505396ENSG00000249830ENST00000512521CIL_0008YQ_0002ENSMUSG00000094989ENSMUST00000075549
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008YQ_0001ENSG00000248118ENST00000505443ENSG00000248736ENST00000515086ENSG00000249808ENST00000505396ENSG00000249830ENST00000512521CIL_0008YQ_0002ENSMUSG00000094989ENSMUST00000075549
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000248118 ENST00000505443 0.017±0.00 N/A N/A N/A N/A 0.061±0.00 N/A N/A N/A N/A N/A N/A N/A 0.963±0.41
ENSG00000248736 ENST00000515086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.298±0.09
ENSG00000249808 ENST00000505396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.277±3.92
ENSG00000249830 ENST00000512521 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.377±0.12
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000094989 ENSMUST00000075549 0.605±0.32 0.443±0.20 4.610±3.82 2.753±2.26 0.636±0.30 0.477±0.15 0.452±0.14 0.304±0.18 4.211±6.74 0.242±0.15 0.236±0.11 0.510±0.32 0.139±0.08 0.238±0.20

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