C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00090W_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm708 VISTA 9606 18:55810302-56412661
GeneTranscriptPositionBiotype
ENSG00000206129 (CTD-2008L17.2)
 ENST00000382897 (CTD-2008L17.2-001) 56003613-56191262 lincRNA
ENST00000589754 (CTD-2008L17.2-002) 56040332-56068370 lincRNA
ENSG00000260930 (RP11-214L13.1)
 ENST00000563553 (RP11-214L13.1-001) 55881688-55920199 lincRNA
ENSG00000267172 (RP11-397A16.3)
 ENST00000585985 (RP11-397A16.3-001) 55817167-55819759 lincRNA
ENSG00000267327 (CTD-2008L17.1)
 ENST00000588803 (CTD-2008L17.1-001) 55998339-56023522 lincRNA
ENST00000589440 (CTD-2008L17.1-002) 55893038-56023462 lincRNA
ENSG00000267399 (RP11-456O19.5)
 ENST00000589617 (RP11-456O19.5-001) 56061109-56063078 lincRNA
ENSG00000267712 (RP11-456O19.4)
long intergenic non-protein coding RNA 1539 		ENST00000587904 (RP11-456O19.4-001) 56083362-56137517 lincRNA
ENST00000589293 (RP11-456O19.4-006) 56095921-56137483 lincRNA
ENST00000589447 (RP11-456O19.4-004) 56105106-56109824 lincRNA
ENST00000590484 (RP11-456O19.4-003) 56095990-56137349 lincRNA
ENST00000591974 (RP11-456O19.4-002) 56083356-56137536 lincRNA
ENST00000593282 (RP11-456O19.4-005) 56087237-56109824 lincRNA
ENSG00000267732 (RP11-456O19.3)
 ENST00000590589 (RP11-456O19.3-001) 56138612-56143221 lincRNA
CIL_00090W_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm708 VISTA 10090 18:68609329-69211841
GeneTranscriptPositionBiotype
ENSMUSG00000024546 (4930546C10Rik)
RIKEN cDNA 4930546C10 gene 		ENSMUST00000025428 (4930546C10Rik-201) 68944633-68950141 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00090W_0001ENSG00000206129ENST00000382897ENST00000589754ENSG00000260930ENST00000563553ENSG00000267172ENST00000585985ENSG00000267327ENST00000588803ENST00000589440ENSG00000267399ENST00000589617ENSG00000267712ENST00000587904ENST00000589293ENST00000589447ENST00000590484ENST00000591974ENST00000593282ENSG00000267732ENST00000590589CIL_00090W_0002ENSMUSG00000024546ENSMUST00000025428
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00090W_0001ENSG00000206129ENST00000382897ENST00000589754ENSG00000260930ENST00000563553ENSG00000267172ENST00000585985ENSG00000267327ENST00000588803ENST00000589440ENSG00000267399ENST00000589617ENSG00000267712ENST00000587904ENST00000591974ENST00000593282ENSG00000267732ENST00000590589CIL_00090W_0002ENSMUSG00000024546ENSMUST00000025428
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000206129 ENST00000382897 0.015±0.00 0.015±0.00 0.023±0.00 0.026±0.00 0.034±0.00 0.044±0.04 0.013±0.00 0.044±0.00 0.127±0.00 0.009±0.00 N/A 0.086±0.04 N/A 0.085±0.04
ENST00000589754 0.066±0.00 0.415±0.00 N/A 0.151±0.00 0.107±0.00 N/A N/A 0.071±0.00 0.061±0.00 0.032±0.00 0.060±0.00 N/A N/A N/A
ENSG00000260930 ENST00000563553 N/A N/A N/A N/A 0.148±0.00 N/A N/A 0.009±0.00 N/A N/A N/A N/A 0.011±0.00 N/A
ENSG00000267172 ENST00000585985 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.033±0.00 0.010±0.00
ENSG00000267327 ENST00000588803 N/A N/A 0.202±0.00 0.116±0.05 0.128±0.00 N/A 0.029±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000589440 N/A 0.092±0.00 0.855±0.00 0.054±0.00 0.049±0.00 N/A 0.456±0.23 0.208±0.00 N/A 0.181±0.00 N/A 0.140±0.01 0.495±0.17 0.044±0.00
ENSG00000267399 ENST00000589617 N/A N/A N/A N/A 0.035±0.00 N/A N/A N/A N/A 0.076±0.00 N/A N/A N/A 0.288±0.04
ENSG00000267712 ENST00000587904 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.141±0.00
ENST00000589293 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589447 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591974 N/A N/A N/A 0.006±0.00 N/A N/A N/A N/A N/A N/A N/A 0.099±0.00 N/A 1.831±0.00
ENST00000593282 N/A N/A 0.281±0.00 N/A 0.143±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000267732 ENST00000590589 N/A N/A N/A N/A N/A N/A N/A 0.126±0.00 N/A N/A N/A 0.086±0.00 N/A 0.482±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024546 ENSMUST00000025428 N/A N/A N/A N/A 0.308±0.13 N/A N/A N/A N/A N/A N/A N/A N/A 0.506±0.23

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