C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000948_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1211 VISTA 9606 9:80207371-80808684
GeneTranscriptPositionBiotype
ENSG00000225901 (MTND2P9)
MT-ND2 pseudogene 9 		ENST00000422293 (MTND2P9-001) 80565032-80565962 unprocessed_pseudogene
ENSG00000232981 (RP11-117O7.2)
 ENST00000427672 (RP11-117O7.2-001) 80563571-80564630 unprocessed_pseudogene
ENSG00000236521 (NPAP1P4)
nuclear pore associated protein 1 pseudogene 4 		ENST00000443325 (NPAP1P4-001) 80357029-80360338 processed_pseudogene
CIL_000948_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1211 VISTA 10090 4:70510017-71111660
GeneTranscriptPositionBiotype
ENSMUSG00000039270 (Megf9)
multiple EGF-like-domains 9 		ENSMUST00000037881 (Megf9-002) 70461826-70534995 nonsense_mediated_decay
ENSMUST00000107359 (Megf9-001) 70427065-70534928 protein_coding
ENSMUSG00000083549 (Gm11227)
predicted gene 11227 		ENSMUST00000119774 (Gm11227-001) 71072673-71073143 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000948_0001ENSG00000225901ENST00000422293ENSG00000232981ENST00000427672ENSG00000236521ENST00000443325CIL_000948_0002ENSMUSG00000039270ENSMUST00000037881ENSMUST00000107359ENSMUSG00000083549ENSMUST00000119774
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000948_0001ENSG00000225901ENST00000422293ENSG00000232981ENST00000427672ENSG00000236521ENST00000443325CIL_000948_0002ENSMUSG00000039270ENSMUST00000037881ENSMUST00000107359ENSMUSG00000083549ENSMUST00000119774
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000225901 ENST00000422293 0.077±0.00 0.082±0.00 0.423±0.00 0.032±0.00 0.048±0.00 0.057±0.00 0.097±0.09 0.169±0.00 0.016±0.00 N/A 0.079±0.00 0.010±0.00 N/A 0.198±0.16
ENSG00000232981 ENST00000427672 0.014±0.00 0.212±0.00 0.441±0.00 N/A N/A N/A 0.013±0.00 0.053±0.00 N/A N/A N/A N/A N/A 0.128±0.00
ENSG00000236521 ENST00000443325 N/A 0.122±0.00 0.703±0.00 N/A 0.012±0.00 0.006±0.00 0.005±0.00 0.177±0.00 0.144±0.00 0.083±0.00 N/A 0.093±0.06 N/A 0.068±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000039270 ENSMUST00000037881 2.967±0.92 10.264±1.69 N/A N/A 7.049±3.10 3.360±0.86 0.969±0.19 2.220±0.46 2.180±0.97 7.050±2.51 N/A 4.031±1.44 N/A 1.908±0.18
ENSMUST00000107359 5.229±1.54 1.950±0.57 4.371±0.18 7.724±4.39 2.927±0.64 1.007±0.24 1.629±0.19 1.997±0.21 1.862±0.66 4.880±0.73 0.570±0.07 1.932±0.82 2.023±1.00 1.588±0.29
ENSMUSG00000083549 ENSMUST00000119774 0.195±0.00 N/A N/A N/A N/A 0.244±0.00 0.269±0.00 N/A N/A N/A N/A N/A N/A N/A

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