C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00094U_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm403 VISTA 9606 7:25249823-25851691
GeneTranscriptPositionBiotype
ENSG00000223561 (AC003090.1)
 ENST00000423689 (AC003090.1-002) 25657071-25662941 lincRNA
ENST00000446840 (AC003090.1-001) 25593351-25663053 lincRNA
ENST00000456777 (AC003090.1-005) 25594533-25750994 lincRNA
ENSG00000233824 (AC003985.1)
 ENST00000414127 (AC003985.1-001) 25321302-25326815 lincRNA
ENSG00000239622 (CTA-242H14.1)
 ENST00000466070 (CTA-242H14.1-001) 25689580-25689959 processed_pseudogene
ENSG00000260951 (RP5-978I12.1)
 ENST00000562268 (RP5-978I12.1-001) 25358240-25359908 lincRNA

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_00094U_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm403 VISTA 10090 6:50624548-51226237
GeneTranscriptPositionBiotype
ENSMUSG00000029831 (Npvf)
neuropeptide VF precursor 		ENSMUST00000031853 (Npvf-001) 50650672-50654439 protein_coding
ENSMUSG00000073072 (G930045G22Rik)
RIKEN cDNA G930045G22 gene 		ENSMUST00000101402 (G930045G22Rik-201) 50846713-50847770 protein_coding
ENSMUST00000161723 (G930045G22Rik-001) 50846524-50878079 protein_coding
ENSMUSG00000099538 (RP23-460N4.1)
predicted gene 29004 		ENSMUST00000187879 (RP23-460N4.1-001) 51003175-51004253 lincRNA

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00094U_0001ENSG00000223561ENST00000423689ENST00000446840ENST00000456777ENSG00000233824ENST00000414127ENSG00000239622ENST00000466070ENSG00000260951ENST00000562268CIL_00094U_0002ENSMUSG00000029831ENSMUST00000031853ENSMUSG00000073072ENSMUST00000101402ENSMUST00000161723ENSMUSG00000099538ENSMUST00000187879
Region; Gene Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00094U_0001ENSG00000223561ENST00000423689ENST00000446840ENST00000456777ENSG00000233824ENST00000414127ENSG00000239622ENST00000466070ENSG00000260951ENST00000562268CIL_00094U_0002ENSMUSG00000029831ENSMUST00000031853ENSMUSG00000073072ENSMUST00000101402ENSMUST00000161723ENSMUSG00000099538ENSMUST00000187879
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000223561 ENST00000423689 N/A N/A 0.096±0.00 0.171±0.00 0.279±0.00 0.071±0.00 N/A 0.052±0.00 N/A N/A N/A N/A N/A
ENST00000446840 0.019±0.00 N/A 0.045±0.00 0.573±0.00 0.306±0.00 0.161±0.10 1.054±0.00 0.145±0.12 N/A N/A 0.113±0.06 0.046±0.02 1.420±0.32
ENST00000456777 N/A N/A 0.054±0.00 N/A N/A N/A N/A N/A N/A 0.084±0.00 N/A N/A N/A
ENSG00000233824 ENST00000414127 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.199±0.00
ENSG00000239622 ENST00000466070 N/A N/A 0.128±0.00 0.924±0.00 N/A N/A N/A N/A 0.114±0.00 N/A N/A N/A 0.052±0.00
ENSG00000260951 ENST00000562268 N/A 0.054±0.00 0.041±0.03 N/A 0.146±0.00 N/A N/A N/A 0.035±0.00 N/A 0.085±0.08 N/A 0.262±0.13
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029831 ENSMUST00000031853 N/A N/A 0.130±0.05 N/A N/A N/A N/A N/A N/A N/A 0.104±0.00 0.014±0.00 0.051±0.00
ENSMUSG00000073072 ENSMUST00000101402 N/A N/A 0.022±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161723 N/A N/A 0.015±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.003±0.00 N/A
ENSMUSG00000099538 ENSMUST00000187879 N/A N/A 0.008±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.192±0.00

Loading