C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: recombination signal binding protein for immunoglobulin kappa J region a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000005067 rbpja-201 ENSDARG00000003398 7955 + 1:13339435-13348758 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000005067
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000005067 2.967±0.62 2.774±0.59 2.716±0.45 0.765±0.00 1.557±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000978 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0000982 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity
GO:0001756 IGI somitogenesis
GO:0001757 IMP somite specification
GO:0002040 IGI sprouting angiogenesis
GO:0003140 IGI determination of left/right asymmetry in lateral mesoderm
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007219 IMP Notch signaling pathway
GO:0007367 IMP segment polarity determination
GO:0007368 IGI determination of left/right symmetry
GO:0007507 IMP heart development
GO:0022008 IGI neurogenesis
GO:0030325 IGI adrenal gland development
GO:0039021 IGI pronephric glomerulus development
GO:0039022 IGI pronephric duct development
GO:0060840 IGI artery development
GO:0072149 IGI glomerular visceral epithelial cell fate commitment

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113865 Rbpj-203 protein_coding Mus_musculus 0 1031

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