C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: integrin, alpha 5 (fibronectin receptor, alpha polypeptide)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000018301 itga5-001 ENSDARG00000006353 7955 - 23:33661296-33771832 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000018301
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000018301 0.585±0.41 15.692±5.04 2.575±0.28 0.472±0.00 5.283±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001501 IMP skeletal system development
GO:0001756 IMP somitogenesis
GO:0001968 IGI fibronectin binding
GO:0007155 IEA cell adhesion
GO:0007229 IEA integrin-mediated signaling pathway
GO:0008305 IEA integrin complex
GO:0016020 IEA membrane
GO:0016021 NAS integral to membrane
GO:0046982 IPI protein heterodimerization activity
GO:0085029 IMP extracellular matrix assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023128 Itga5-201 protein_coding Mus_musculus 1e-22 113

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