C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: homeo box A13a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000026989 hoxa13a-001 ENSDARG00000007609 7955 + 19:19195251-19197036 protein_coding

Danio rerio EnsemblZv9

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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyENSDART00000026989
Transcript ID Brain Heart Kidney
ENSDART00000026989 0.032±0.00 0.035±0.00 0.038±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OD CIL_0007OD_0006 UCNEbase 19:19094506-19320701

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0000981 IDA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0006366 IDA transcription from RNA polymerase II promoter
GO:0007275 IEA multicellular organismal development
GO:0043565 IEA sequence-specific DNA binding

Homologs

No Homologs available.

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