C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding protein, fox-1 homolog (C. elegans) 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000073985 rbfox2-201 ENSDARG00000052182 7955 + 6:271848-295086 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000073985
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000073985 34.421±14.84 4.546±3.05 2.924±0.42 1.600±0.00 6.079±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0043484 IMP regulation of RNA splicing
GO:0048739 IGI cardiac muscle fiber development
GO:0048741 IGI skeletal muscle fiber development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000152830 Satb1-002 protein_coding Mus_musculus 0.0002 53

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