C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: NK2 transcription factor related 2b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000074425 nkx2.2b-001 ENSDARG00000052550 7955 - 20:49098508-49102431 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainMuscleENSDART00000074425
Transcript ID Brain Muscle
ENSDART00000074425 0.441±0.04 0.046±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0021508 IMP floor plate formation
GO:0021514 IGI ventral spinal cord interneuron differentiation
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000382723 MSX1-001 protein_coding Homo_sapiens 0.0001 53
ENST00000468421 MSX1-002 processed_transcript Homo_sapiens 0.00003 53

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