C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: orthopedia homolog b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000081249 otpb-001 ENSDARG00000058379 7955 - 5:53469467-53472796 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyMuscleENSDART00000081249
Transcript ID Brain Kidney Muscle
ENSDART00000081249 1.703±0.52 0.072±0.00 0.142±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OX CIL_0007OX_0005 UCNEbase 5:53466490-53800957

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000976 IEA transcription regulatory region sequence-specific DNA binding
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007275 IEA multicellular organismal development
GO:0007399 IEA nervous system development
GO:0021854 IMP hypothalamus development
GO:0021884 IGI forebrain neuron development
GO:0030154 IEA cell differentiation
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022195 Otp-001 protein_coding Mus_musculus 0.0000000001 73

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