C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: si:dkey-78k22.1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000125140 si:dkey-78k22.1-201 ENSDARG00000091284 7955 + 4:48211995-48220622 protein_coding

Danio rerio EnsemblZv9

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainMuscleENSDART00000125140
Transcript ID Brain Muscle
ENSDART00000125140 0.058±0.03 0.028±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003UL CIL_0003UL_0002 CGP 4:48202130-48355822

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000187879 ZNF222-002 protein_coding Homo_sapiens 0.00003 55
ENST00000262894 ZNF225-001 protein_coding Homo_sapiens 0.0000005 62
ENST00000270014 ZNF155-001 protein_coding Homo_sapiens 0.0000003 62
ENST00000391960 ZNF222-001 protein_coding Homo_sapiens 0.00003 55
ENST00000407951 ZNF155-002 protein_coding Homo_sapiens 0.0000002 62
ENST00000421176 ZNF284-001 protein_coding Homo_sapiens 0.00000001 68
ENST00000429154 ZNF230-001 protein_coding Homo_sapiens 0.000006 58
ENST00000585568 ZNF230-002 nonsense_mediated_decay Homo_sapiens 0.000006 58
ENST00000590612 ZNF225-003 protein_coding Homo_sapiens 0.0000003 62
ENST00000590615 ZNF155-003 protein_coding Homo_sapiens 0.0000002 62
ENST00000591793 ZNF223-001 nonsense_mediated_decay Homo_sapiens 0.000000009 68
ENST00000592780 ZNF225-002 protein_coding Homo_sapiens 0.0000003 62
ENST00000611002 ZNF155-201 protein_coding Homo_sapiens 0.0000003 62

Loading