C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pyrroline-5-carboxylate reductase 1b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000128453 pycr1b-201 ENSDARG00000086821 7955 + 11:46091920-46098624 protein_coding

Danio rerio EnsemblZv9

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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverMuscleENSDART00000128453
Transcript ID Brain Heart Liver Muscle
ENSDART00000128453 15.708±0.00 20.367±0.00 8.640±0.00 13.656±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004735 IEA pyrroline-5-carboxylate reductase activity
GO:0005575 ND cellular_component
GO:0006561 IEA proline biosynthetic process
GO:0008652 IEA cellular amino acid biosynthetic process
GO:0016491 IEA oxidoreductase activity
GO:0055114 IEA oxidation-reduction process
GO:0055129 IEA L-proline biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000343818 PYCR2-001 protein_coding Homo_sapiens 0 449
ENST00000432920 RP4-559A3.7-001 protein_coding Homo_sapiens 8e-36 156
ENST00000446534 PYCR2-008 retained_intron Homo_sapiens 0 392
ENST00000466127 PYCR2-009 retained_intron Homo_sapiens 4e-39 165
ENST00000478402 PYCR2-002 retained_intron Homo_sapiens 0 344
ENST00000612039 PYCR2-201 protein_coding Homo_sapiens 2.94273e-44 183
ENST00000612651 PYCR2-202 protein_coding Homo_sapiens 0 446

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