C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: trafficking protein particle complex 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000000384 Trappc10-201 ENSMUSG00000000374 10090 - 10:78186725-78244642 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000000384
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000000384 15.441±3.82 18.975±4.07 12.959±4.11 12.935±2.32 12.537±2.27 39.833±5.26 13.865±1.44 19.487±1.92 8.579±2.94 17.970±3.82 10.179±1.33 16.426±3.84 12.809±4.43 5.881±2.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00066G CIL_00066G_0002 CGP 10:78170910-78244642

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000291574 TRAPPC10-001 protein_coding Homo_sapiens 0 3927
ENST00000380221 TRAPPC10-003 protein_coding Homo_sapiens 0 1208
ENST00000422875 TRAPPC10-002 nonsense_mediated_decay Homo_sapiens 0 2719
ENST00000459741 TRAPPC10-004 retained_intron Homo_sapiens 0 379
ENST00000468864 TRAPPC10-005 retained_intron Homo_sapiens 0 379
ENST00000623744 TMEM1-002 retained_intron Homo_sapiens 0 379
ENST00000623998 TMEM1-001 protein_coding Homo_sapiens 0 379

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