C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: testis-specific serine kinase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000000421 Tssk3-001 ENSMUSG00000000411 10090 - 4:129489014-129491022 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000000421
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000000421 0.050±0.02 0.061±0.01 0.108±0.00 0.076±0.05 0.094±0.03 0.065±0.03 0.082±0.04 0.142±0.07 0.121±0.00 0.168±0.13 0.207±0.08 121.219±25.57

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008AA CIL_0008AA_0002 VISTA 4:129413466-130014337
CIL_0001N1 CIL_0001N1_0002 CGP 4:129489014-129491956

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 ISS magnesium ion binding
GO:0004674 ISS protein serine/threonine kinase activity
GO:0005524 ISS ATP binding
GO:0005622 IC intracellular
GO:0006468 ISS protein phosphorylation
GO:0007275 IEA multicellular organismal development
GO:0007283 IEP spermatogenesis
GO:0035556 NAS intracellular signal transduction
GO:0048240 NAS sperm capacitation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000373534 TSSK3-001 protein_coding Homo_sapiens 0 1583
ENST00000415596 FAM229A-004 processed_transcript Homo_sapiens 0 298
ENST00000416512 FAM229A-002 retained_intron Homo_sapiens 0 872
ENST00000574315 TSSK3-002 protein_coding Homo_sapiens 0 248

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