C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: germ cell-less homolog 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000001185 Gmcl1-001 ENSMUSG00000001157 10090 - 6:86691768-86733378 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000001185
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000001185 4.126±1.80 5.871±2.72 7.319±0.60 9.530±3.70 4.483±2.71 12.381±3.92 1.390±0.24 6.337±0.57 3.504±0.82 7.719±1.13 0.913±0.32 9.766±5.10 7.559±3.64 28.531±8.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089T CIL_00089T_0002 VISTA 6:86179085-86780169

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005635 IDA nuclear envelope
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0007275 IEA multicellular organismal development
GO:0007283 TAS spermatogenesis
GO:0016363 IDA nuclear matrix
GO:0030154 IEA cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000282570 GMCL1-001 protein_coding Homo_sapiens 0 1844
ENST00000463439 GMCL1P1-001 processed_pseudogene Homo_sapiens 0 1613
ENST00000468386 GMCL1-002 processed_transcript Homo_sapiens 0 496
ENST00000471404 GMCL1-003 retained_intron Homo_sapiens 0 451
ENST00000495047 GMCL1-004 processed_transcript Homo_sapiens 0 433

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