C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DNA segment, Chr 10, Johns Hopkins University 81 expressed
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000001242 D10Jhu81e-201 ENSMUSG00000053329 10090 - 10:78162067-78169768 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000001242
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000001242 52.855±12.05 247.992±64.18 38.006±7.21 34.754±20.19 63.239±33.96 33.518±17.72 127.383±22.04 77.543±19.45 45.369±24.18 35.458±2.65 106.489±12.02 43.205±19.15 29.677±7.84 11.092±0.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00066M CIL_00066M_0002 CGP 10:78069360-78169768
CIL_0002FY CIL_0002FY_0002 CGP 10:78162067-78185149

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000291577 C21orf33-001 protein_coding Homo_sapiens 0 756
ENST00000348499 C21orf33-011 protein_coding Homo_sapiens 0 370
ENST00000389690 C21orf33-004 protein_coding Homo_sapiens 0 453
ENST00000419699 C21orf33-010 protein_coding Homo_sapiens 0 527
ENST00000427803 C21orf33-002 protein_coding Homo_sapiens 0 453
ENST00000449622 C21orf33-006 protein_coding Homo_sapiens 0 335
ENST00000480786 C21orf33-009 retained_intron Homo_sapiens 0 453
ENST00000488392 C21orf33-007 retained_intron Homo_sapiens 1.4013e-45 187
ENST00000493883 C21orf33-003 processed_transcript Homo_sapiens 0 339
ENST00000495007 C21orf33-005 retained_intron Homo_sapiens 0 697
ENST00000620015 CH507-9B2.3-013 protein_coding Homo_sapiens 0 641
ENST00000620528 CH507-9B2.3-001 protein_coding Homo_sapiens 0 756
ENST00000623390 CH507-9B2.3-015 processed_transcript Homo_sapiens 0 289
ENST00000623476 CH507-9B2.4-001 protein_coding Homo_sapiens 0 641
ENST00000623810 CH507-9B2.3-010 protein_coding Homo_sapiens 0 339
ENST00000624120 CH507-9B2.3-002 protein_coding Homo_sapiens 0 370
ENST00000624648 CH507-9B2.3-011 protein_coding Homo_sapiens 0 453
ENST00000624714 CH507-9B2.3-009 retained_intron Homo_sapiens 0 453
ENST00000624810 CH507-9B2.3-005 protein_coding Homo_sapiens 0 372
ENST00000625036 CH507-9B2.3-003 protein_coding Homo_sapiens 0 287

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