C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 26, member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000001253 Slc26a4-201 ENSMUSG00000020651 10090 - 12:31519827-31559969 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000001253
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000001253 0.073±0.00 0.882±0.29 0.015±0.00 0.366±0.35 0.059±0.04 0.128±0.10 0.038±0.02 20.355±3.05 0.077±0.08 0.648±0.23 0.017±0.00 0.152±0.07 1.160±0.82 0.081±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ZV CIL_0008ZV_0002 VISTA 12:31009963-31611477

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006821 IEA chloride transport
GO:0006885 IMP regulation of pH
GO:0008271 IEA secondary active sulfate transmembrane transporter activity
GO:0008509 ISS anion transmembrane transporter activity
GO:0009887 ISS organ morphogenesis
GO:0015108 IEA chloride transmembrane transporter activity
GO:0015111 IEA iodide transmembrane transporter activity
GO:0015698 IEA inorganic anion transport
GO:0015705 IEA iodide transport
GO:0016021 IEA integral component of membrane
GO:0016324 IDA apical plasma membrane
GO:0031526 IDA brush border membrane
GO:0032880 IMP regulation of protein localization
GO:0070062 IEA extracellular vesicular exosome
GO:1902358 IEA sulfate transmembrane transport
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265715 SLC26A4-001 protein_coding Homo_sapiens 0 2460
ENST00000460748 SLC26A4-006 processed_transcript Homo_sapiens 0 263
ENST00000477350 SLC26A4-003 processed_transcript Homo_sapiens 0 442
ENST00000480841 SLC26A4-005 processed_transcript Homo_sapiens 0 695
ENST00000492030 SLC26A4-007 processed_transcript Homo_sapiens 2e-22 110
ENST00000497446 SLC26A4-004 processed_transcript Homo_sapiens 0 363

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