C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: caseinolytic mitochondrial matrix peptidase proteolytic subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000002735 Clpp-201 ENSMUSG00000002660 10090 + 17:56990264-56996371 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000002735
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000002735 42.584±11.55 128.051±20.79 33.060±6.33 40.972±17.47 38.168±24.36 42.922±24.04 33.620±5.92 63.540±6.92 49.424±12.90 27.783±7.72 15.804±0.97 78.304±34.55 32.164±9.85 9.957±3.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005OI CIL_0005OI_0002 CGP 17:56953490-56996371
CIL_0005OH CIL_0005OH_0002 CGP 17:56990264-56999322

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004252 ISS serine-type endopeptidase activity
GO:0005515 IPI protein binding
GO:0005739 IDA mitochondrion
GO:0005759 ISS mitochondrial matrix
GO:0006515 ISA misfolded or incompletely synthesized protein catabolic process
GO:0009368 ISS endopeptidase Clp complex
GO:0042802 IEA identical protein binding
GO:0051260 IEA protein homooligomerization
GO:0051603 ISS proteolysis involved in cellular protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000245816 CLPP-001 protein_coding Homo_sapiens 0 743
ENST00000596070 CLPP-003 retained_intron Homo_sapiens 0 580
ENST00000596149 CLPP-005 protein_coding Homo_sapiens 0 680
ENST00000596605 CLPP-004 protein_coding Homo_sapiens 0 303

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