C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bromodomain adjacent to zinc finger domain, 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000002825 Baz1b-001 ENSMUSG00000002748 10090 + 5:135187264-135246129 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000002825
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000002825 15.889±4.88 12.428±6.07 15.373±0.55 24.689±1.98 12.060±6.10 8.816±3.54 4.497±0.72 8.062±1.63 8.809±5.35 13.076±1.70 8.062±2.98 17.848±11.05 18.982±8.54 3.311±1.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005XG CIL_0005XG_0002 CGP 5:135168283-135246129
CIL_00050Q CIL_00050Q_0002 CGP 5:135187264-135251230

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000793 IDA condensed chromosome
GO:0003007 IMP heart morphogenesis
GO:0003682 ISS chromatin binding
GO:0004713 ISS protein tyrosine kinase activity
GO:0004715 IEA non-membrane spanning protein tyrosine kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005721 IDA pericentric heterochromatin
GO:0006302 IMP double-strand break repair
GO:0006333 IDA chromatin assembly or disassembly
GO:0006338 IDA chromatin remodeling
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IMP regulation of transcription, DNA-templated
GO:0006974 ISS cellular response to DNA damage stimulus
GO:0008270 IEA zinc ion binding
GO:0016572 ISS histone phosphorylation
GO:0018108 IEA peptidyl-tyrosine phosphorylation
GO:0035173 ISS histone kinase activity
GO:0042393 IPI histone binding
GO:0043596 IEA nuclear replication fork
GO:0048096 IMP chromatin-mediated maintenance of transcription
GO:0070577 ISS lysine-acetylated histone binding
GO:0071884 IMP vitamin D receptor activator activity
GO:2000273 IMP positive regulation of receptor activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000088610 rangap1a-001 protein_coding Danio_rerio 0.0000007 60
ENST00000339594 BAZ1B-001 protein_coding Homo_sapiens 0 5118
ENST00000404251 BAZ1B-002 protein_coding Homo_sapiens 0 5142
ENST00000466844 BAZ1B-003 retained_intron Homo_sapiens 0 298

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