C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interleukin 17 receptor A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000002976 Il17ra-201 ENSMUSG00000002897 10090 + 6:120463197-120483727 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000002976
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000002976 8.074±4.04 7.299±1.00 3.101±0.23 1.362±0.10 21.323±7.72 8.642±0.94 1.454±0.32 9.495±2.35 6.066±1.04 13.615±0.94 0.481±0.11 17.356±6.48 3.232±1.74 1.359±0.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008AW CIL_0008AW_0002 VISTA 6:119874234-120475208
CIL_00083Y CIL_00083Y_0002 VISTA 6:120053928-120655330
CIL_00070M CIL_00070M_0002 CGP 6:120463197-120493807

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005886 IDA plasma membrane
GO:0016021 IEA integral component of membrane
GO:0032747 IEA positive regulation of interleukin-23 production
GO:0071345 IEA cellular response to cytokine stimulus
GO:0072537 IEA fibroblast activation
GO:1900017 IGI positive regulation of cytokine production involved in inflammatory response

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000319363 IL17RA-001 protein_coding Homo_sapiens 0 1408
ENST00000477874 IL17RA-004 processed_transcript Homo_sapiens 0 311
ENST00000612619 IL17RA-201 protein_coding Homo_sapiens 0 704

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