C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 65
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000003444 Ccdc65-201 ENSMUSG00000003354 10090 + 15:98708207-98723326 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000003444
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000003444 0.327±0.28 0.136±0.07 1.414±0.22 1.159±0.45 0.117±0.06 0.246±0.12 0.100±0.06 0.273±0.07 0.021±0.01 1.915±0.46 0.031±0.02 3.932±1.26 0.139±0.12 99.174±11.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003DN CIL_0003DN_0003 CGP 15:98708207-98728198

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000266984 CCDC65-002 protein_coding Homo_sapiens 0 1195
ENST00000320516 CCDC65-001 protein_coding Homo_sapiens 0 1195
ENST00000512059 RP11-26C10.1-001 processed_pseudogene Homo_sapiens 0 206
ENST00000547861 CCDC65-004 nonsense_mediated_decay Homo_sapiens 0 1085
ENST00000552188 CCDC65-003 retained_intron Homo_sapiens 0 372
ENST00000552942 CCDC65-005 protein_coding Homo_sapiens 0 614

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