C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 3, subunit G
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000004206 Eif3g-201 ENSMUSG00000070319 10090 - 9:20894352-20898600 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000004206
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000004206 50.055±9.04 64.392±5.83 61.273±5.37 70.747±26.76 43.473±13.55 64.138±6.48 29.409±4.51 50.954±5.39 67.481±19.63 42.845±2.18 36.456±1.72 96.262±37.31 202.747±146.18 176.273±85.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004BQ CIL_0004BQ_0003 CGP 9:20894352-20959888

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0001731 IEA formation of translation preinitiation complex
GO:0003743 IDA translation initiation factor activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005852 IDA eukaryotic translation initiation factor 3 complex
GO:0006413 IDA translational initiation
GO:0006446 IEA regulation of translational initiation
GO:0016282 IEA eukaryotic 43S preinitiation complex
GO:0033290 IEA eukaryotic 48S preinitiation complex
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000253108 EIF3G-001 protein_coding Homo_sapiens 0 1216
ENST00000586151 EIF3G-010 nonsense_mediated_decay Homo_sapiens 0 198
ENST00000587146 EIF3G-019 protein_coding Homo_sapiens 0 388
ENST00000587168 EIF3G-012 processed_transcript Homo_sapiens 0 254
ENST00000587590 EIF3G-005 retained_intron Homo_sapiens 0 198
ENST00000587681 EIF3G-008 retained_intron Homo_sapiens 0 398
ENST00000588709 EIF3G-018 protein_coding Homo_sapiens 0 976
ENST00000589009 EIF3G-004 retained_intron Homo_sapiens 0 209
ENST00000589454 EIF3G-006 protein_coding Homo_sapiens 0 996
ENST00000589458 EIF3G-002 retained_intron Homo_sapiens 0 209
ENST00000590158 EIF3G-014 retained_intron Homo_sapiens 0 451
ENST00000590940 EIF3G-013 retained_intron Homo_sapiens 0 363
ENST00000593054 EIF3G-017 protein_coding Homo_sapiens 0 267
ENST00000593066 EIF3G-011 nonsense_mediated_decay Homo_sapiens 0 628
ENST00000593095 EIF3G-007 nonsense_mediated_decay Homo_sapiens 0 398

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