C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: v-ral simian leukemia viral oncogene homolog B (ras related)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000004565 Ralb-001 ENSMUSG00000004451 10090 - 1:119470305-119504794 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000004565
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000004565 27.107±0.59 32.614±2.81 21.719±6.80 11.077±2.43 16.857±1.92 31.133±3.66 10.014±1.26 27.120±0.90 7.764±2.72 30.397±0.96 3.056±0.73 24.744±4.34 53.780±20.37 6.362±1.28

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000910 ISS cytokinesis
GO:0001928 ISS regulation of exocyst assembly
GO:0003924 ISS GTPase activity
GO:0005515 IEA protein binding
GO:0005525 ISS GTP binding
GO:0005886 ISS plasma membrane
GO:0006184 IEA GTP catabolic process
GO:0006915 IEA apoptotic process
GO:0007265 IEA Ras protein signal transduction
GO:0030496 ISS midbody
GO:0060178 ISS regulation of exocyst localization
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000272519 RALB-001 protein_coding Homo_sapiens 0 726
ENST00000295890 COX18-001 protein_coding Homo_sapiens 0.00002 57
ENST00000412383 RALB-003 protein_coding Homo_sapiens 0 523
ENST00000420510 RALB-007 protein_coding Homo_sapiens 0 708
ENST00000431732 RALB-008 nonsense_mediated_decay Homo_sapiens 3.00018e-42 176
ENST00000447591 RALB-006 protein_coding Homo_sapiens 0 460
ENST00000449649 RALB-009 protein_coding Homo_sapiens 0 363
ENST00000449739 COX18-003 nonsense_mediated_decay Homo_sapiens 0.00002 57
ENST00000482926 TAF8-011 processed_transcript Homo_sapiens 0.000001 58

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