C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: v-crk sarcoma virus CT10 oncogene homolog (avian)-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000006293 Crkl-001 ENSMUSG00000006134 10090 + 16:17451987-17486255 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000006293
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000006293 2.429±0.94 12.836±1.61 16.364±0.44 6.464±3.02 9.592±1.61 1.369±0.27 4.506±3.52 4.311±1.79 9.058±4.36 15.352±0.85 5.164±3.63 0.891±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PT CIL_0008PT_0002 VISTA 16:16870677-17470725
CIL_0002X5 CIL_0002X5_0002 CGP 16:17406003-17486255
CIL_0002X4 CIL_0002X4_0002 CGP 16:17451987-17507485

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001568 IGI blood vessel development
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0007389 IGI pattern specification process
GO:0007507 IGI heart development
GO:0009887 IMP organ morphogenesis
GO:0009952 IGI anterior/posterior pattern specification
GO:0044822 IEA poly(A) RNA binding
GO:0048538 IGI thymus development
GO:0060017 IGI parathyroid gland development
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000354336 CRKL-001 protein_coding Homo_sapiens 0 1613
ENST00000411769 CRKL-002 nonsense_mediated_decay Homo_sapiens 0 1546

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