C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: telomerase associated protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000006444 Tep1-201 ENSMUSG00000006281 10090 - 14:50824062-50870560 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000006444
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000006444 8.107±0.85 3.722±1.90 6.536±1.18 0.508±0.12 6.549±1.62 16.318±4.70 1.257±0.42 3.394±0.61 1.428±0.61 5.316±1.43 1.595±0.23 5.843±1.41 2.208±0.56 1.914±0.62

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001OA CIL_0001OA_0002 CGP 14:50807946-50870560
CIL_0001OB CIL_0001OB_0002 CGP 14:50824062-50893255

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000722 IEA telomere maintenance via recombination
GO:0000781 IEA chromosome, telomeric region
GO:0003720 IEA telomerase activity
GO:0003723 IMP RNA binding
GO:0005524 IEA ATP binding
GO:0005697 IEA telomerase holoenzyme complex
GO:0005737 ISO cytoplasm
GO:0006278 IEA RNA-dependent DNA replication
GO:0016363 ISO nuclear matrix

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262715 TEP1-001 protein_coding Homo_sapiens 0 5812
ENST00000553365 TEP1-006 nonsense_mediated_decay Homo_sapiens 0 435
ENST00000555008 TEP1-004 nonsense_mediated_decay Homo_sapiens 0 4377
ENST00000555727 TEP1-002 nonsense_mediated_decay Homo_sapiens 0 3238
ENST00000556488 TEP1-010 nonsense_mediated_decay Homo_sapiens 0 730
ENST00000556935 TEP1-003 protein_coding Homo_sapiens 0 5188
ENST00000557314 TEP1-005 nonsense_mediated_decay Homo_sapiens 0 1984
ENST00000557627 TEP1-009 retained_intron Homo_sapiens 0 235

Loading