C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane and coiled-coil domains 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000007046 Tmco6-201 ENSMUSG00000006850 10090 + 18:36735068-36742391 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000007046
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000007046 7.089±1.08 10.751±0.59 11.403±2.02 8.793±2.08 9.765±1.27 11.273±1.49 6.799±0.48 6.856±2.09 8.425±2.25 8.076±2.69 5.082±1.41 2.733±0.17

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006606 IEA protein import into nucleus
GO:0008150 ND biological_process
GO:0008565 IEA protein transporter activity
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000252100 TMCO6-002 protein_coding Homo_sapiens 0 1458
ENST00000394669 TMCO6-012 nonsense_mediated_decay Homo_sapiens 0 318
ENST00000394671 TMCO6-001 protein_coding Homo_sapiens 0 1513
ENST00000504069 TMCO6-018 nonsense_mediated_decay Homo_sapiens 0 318
ENST00000505086 TMCO6-013 nonsense_mediated_decay Homo_sapiens 0 547
ENST00000509605 TMCO6-019 retained_intron Homo_sapiens 0 850
ENST00000510336 TMCO6-006 retained_intron Homo_sapiens 0 1334
ENST00000511410 TMCO6-004 protein_coding Homo_sapiens 0 339
ENST00000513002 TMCO6-008 nonsense_mediated_decay Homo_sapiens 0 479
ENST00000514449 TMCO6-011 retained_intron Homo_sapiens 0 619
ENST00000515265 TMCO6-016 retained_intron Homo_sapiens 0 737
ENST00000515653 TMCO6-009 nonsense_mediated_decay Homo_sapiens 0 283

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