C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: voltage-dependent anion channel 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000009036 Vdac3-201 ENSMUSG00000008892 10090 - 8:22577075-22593813 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000009036
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000009036 20.459±4.27 15.751±3.84 45.204±4.40 12.603±1.08 16.639±5.31 35.588±4.38 29.157±4.32 35.732±14.98 17.967±2.76 18.640±11.38 41.589±18.09 84.024±27.85

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0001662 IMP behavioral fear response
GO:0005739 IDA mitochondrion
GO:0005741 IEA mitochondrial outer membrane
GO:0005743 IDA mitochondrial inner membrane
GO:0006820 IEA anion transport
GO:0007268 IMP synaptic transmission
GO:0007270 IMP neuron-neuron synaptic transmission
GO:0007612 IMP learning
GO:0008308 IEA voltage-gated anion channel activity
GO:0015288 IEA porin activity
GO:0044070 IEA regulation of anion transport
GO:0046930 IEA pore complex
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000022615 VDAC3-003 protein_coding Homo_sapiens 0 1572
ENST00000518495 VDAC3-009 nonsense_mediated_decay Homo_sapiens 0 560
ENST00000518563 VDAC3-008 protein_coding Homo_sapiens 0 479
ENST00000520115 VDAC3-006 protein_coding Homo_sapiens 0 830
ENST00000521158 VDAC3-002 protein_coding Homo_sapiens 0 1186
ENST00000521348 VDAC3-010 retained_intron Homo_sapiens 0 824
ENST00000522010 VDAC3-013 nonsense_mediated_decay Homo_sapiens 0 483
ENST00000522069 VDAC3-014 protein_coding Homo_sapiens 0 737
ENST00000522178 VDAC3-012 retained_intron Homo_sapiens 0 281
ENST00000522572 VDAC3-015 protein_coding Homo_sapiens 0 558
ENST00000604654 VDAC3P1-001 processed_pseudogene Homo_sapiens 0 1050

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