C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, MYND domain containing 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000010188 Zmynd10-201 ENSMUSG00000010044 10090 + 9:107547310-107551319 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000010188
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000010188 0.081±0.02 0.146±0.13 0.112±0.07 1.755±0.31 0.110±0.04 0.095±0.05 0.275±0.24 14.147±0.60 0.307±0.50 5.588±0.45 0.076±0.06 4.095±1.46 0.537±0.52 104.033±24.73

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D8 CIL_0008D8_0002 VISTA 9:107005935-107609958

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0034451 ISS centriolar satellite
GO:0036158 ISS outer dynein arm assembly
GO:0036159 ISS inner dynein arm assembly
GO:0044458 ISS motile cilium assembly
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000231749 ZMYND10-001 protein_coding Homo_sapiens 0 1413
ENST00000360165 ZMYND10-002 protein_coding Homo_sapiens 0 656
ENST00000431869 ZMYND10-006 nonsense_mediated_decay Homo_sapiens 0 496
ENST00000442887 ZMYND10-003 protein_coding Homo_sapiens 0 911
ENST00000443080 ZMYND10-007 nonsense_mediated_decay Homo_sapiens 0 453
ENST00000468182 ZMYND10-008 processed_transcript Homo_sapiens 0 244
ENST00000475688 ZMYND10-005 retained_intron Homo_sapiens 1.99993e-41 174
ENST00000478269 ZMYND10-009 retained_intron Homo_sapiens 0 324

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