C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nitrogen permease regulator-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000010201 Nprl2-201 ENSMUSG00000010057 10090 + 9:107542209-107545704 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000010201
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000010201 11.670±0.58 14.276±0.97 10.080±2.74 20.578±7.65 17.283±4.12 14.155±0.99 11.797±2.18 23.792±3.02 9.687±1.86 10.538±1.40 5.047±0.52 13.087±4.02 7.592±1.80 13.763±5.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D8 CIL_0008D8_0002 VISTA 9:107005935-107609958

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004672 IEA protein kinase activity
GO:0005096 IEA GTPase activator activity
GO:0005515 IEA protein binding
GO:0006468 IEA protein phosphorylation
GO:0033673 IEA negative regulation of kinase activity
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000232501 NPRL2-001 protein_coding Homo_sapiens 0 1485
ENST00000418825 NPRL2-014 nonsense_mediated_decay Homo_sapiens 0 1129
ENST00000429366 NPRL2-010 nonsense_mediated_decay Homo_sapiens 0 760
ENST00000433381 NPRL2-003 nonsense_mediated_decay Homo_sapiens 0 1144
ENST00000433999 NPRL2-016 nonsense_mediated_decay Homo_sapiens 0 1072
ENST00000448302 NPRL2-017 nonsense_mediated_decay Homo_sapiens 0 1007
ENST00000451194 NPRL2-009 nonsense_mediated_decay Homo_sapiens 0 763
ENST00000461020 NPRL2-002 retained_intron Homo_sapiens 0 617
ENST00000467294 NPRL2-004 retained_intron Homo_sapiens 0 322
ENST00000469839 NPRL2-015 retained_intron Homo_sapiens 0 438
ENST00000476064 NPRL2-005 retained_intron Homo_sapiens 0 1249
ENST00000479512 NPRL2-008 retained_intron Homo_sapiens 0 1304
ENST00000480296 NPRL2-012 retained_intron Homo_sapiens 0 311
ENST00000487632 NPRL2-007 retained_intron Homo_sapiens 0 737
ENST00000493465 NPRL2-019 processed_transcript Homo_sapiens 0 294
ENST00000493907 NPRL2-013 retained_intron Homo_sapiens 0 202

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