C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phospholipase C, delta 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000010804 Plcd1-201 ENSMUSG00000010660 10090 - 9:119071527-119093496 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000010804
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000010804 14.234±1.90 5.235±0.83 27.477±5.01 4.878±0.88 12.964±2.50 10.233±6.27 6.509±2.02 3.712±0.28 0.372±0.20 9.312±2.50 1.631±0.66 11.924±3.32 10.634±3.93 2.361±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008CZ CIL_0008CZ_0002 VISTA 9:118558597-119161666
CIL_00099X CIL_00099X_0002 VISTA 9:118563323-119168147
CIL_0005A4 CIL_0005A4_0002 CGP 9:119052778-119093496
CIL_0005VD CIL_0005VD_0002 CGP 9:119071527-119148246

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IGI angiogenesis
GO:0001786 IDA phosphatidylserine binding
GO:0004435 IEA phosphatidylinositol phospholipase C activity
GO:0004629 IDA phospholipase C activity
GO:0004871 IEA signal transducer activity
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005737 ISO cytoplasm
GO:0005829 IDA cytosol
GO:0016042 IEA lipid catabolic process
GO:0032794 IEA GTPase activating protein binding
GO:0035556 IEA intracellular signal transduction
GO:0042127 IGI regulation of cell proliferation
GO:0060716 IGI labyrinthine layer blood vessel development
GO:0070062 IEA extracellular vesicular exosome
GO:0070300 IDA phosphatidic acid binding
GO:1901981 IDA phosphatidylinositol phosphate binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000334661 PLCD1-001 protein_coding Homo_sapiens 0 2564
ENST00000461445 PLCD1-005 retained_intron Homo_sapiens 0 1399
ENST00000463876 PLCD1-006 protein_coding Homo_sapiens 0 2468
ENST00000479619 PLCD1-010 processed_transcript Homo_sapiens 0 619
ENST00000484829 PLCD1-011 retained_intron Homo_sapiens 0 725
ENST00000495367 PLCD1-012 retained_intron Homo_sapiens 0 503

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