C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000011398 Thg1l-001 ENSMUSG00000011254 10090 - 11:45946843-45955494 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000011398
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000011398 2.876±0.82 1.789±0.55 3.793±0.45 2.690±0.62 1.666±0.59 2.154±0.50 1.321±0.33 1.898±0.34 2.711±2.19 1.919±0.51 1.007±0.08 4.028±0.56 3.993±1.23 1.647±1.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00094M CIL_00094M_0002 VISTA 11:45901358-46503267

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005525 IEA GTP binding
GO:0005737 ISS cytoplasm
GO:0005739 IEA mitochondrion
GO:0006400 ISS tRNA modification
GO:0008033 ISS tRNA processing
GO:0008193 ISS tRNA guanylyltransferase activity
GO:0042802 IEA identical protein binding
GO:0051289 IEA protein homotetramerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000055961 thg1l-201 protein_coding Danio_rerio 0 195
ENST00000231198 THG1L-001 protein_coding Homo_sapiens 0 913
ENST00000521655 THG1L-002 nonsense_mediated_decay Homo_sapiens 0 424

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