C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glucose-fructose oxidoreductase domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000013294 Gfod2-001 ENSMUSG00000013150 10090 - 8:105713854-105758664 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000013294
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000013294 1.314±0.42 2.445±0.45 0.595±0.01 8.062±4.81 1.987±0.81 3.223±0.93 0.674±0.05 1.101±0.58 1.091±0.74 2.157±0.10 0.526±0.32 4.272±1.43 0.614±0.26 1.057±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001H0 CIL_0001H0_0002 CGP 8:105708291-105758664
CIL_0005AC CIL_0005AC_0002 CGP 8:105713854-105827350

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005578 IEA proteinaceous extracellular matrix
GO:0016491 IEA oxidoreductase activity
GO:0030198 IDA extracellular matrix organization
GO:0031012 IDA extracellular matrix
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000268797 GFOD2-001 protein_coding Homo_sapiens 0 1522
ENST00000477571 SLC37A3-006 nonsense_mediated_decay Homo_sapiens 0.000000000004 79
ENST00000602279 GFOD2-008 protein_coding Homo_sapiens 0 396
ENST00000602377 GFOD2-002 protein_coding Homo_sapiens 0 1040
ENST00000602496 GFOD2-004 nonsense_mediated_decay Homo_sapiens 0 433
ENST00000602522 GFOD2-003 retained_intron Homo_sapiens 0 1044
ENST00000602627 GFOD2-007 protein_coding Homo_sapiens 0 206
ENST00000602855 GFOD2-005 protein_coding Homo_sapiens 0 435

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