C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: stanniocalcin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000014957 Stc1-201 ENSMUSG00000014813 10090 + 14:69029289-69041401 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000014957
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000014957 2.975±1.43 0.437±0.12 3.344±0.10 1.208±0.73 1.674±0.22 0.427±0.13 0.639±0.13 1.183±0.12 0.109±0.10 1.820±0.54 0.159±0.04 10.606±3.55 0.563±0.27 0.200±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006NB CIL_0006NB_0002 CGP 14:69029289-69175518

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001503 IEA ossification
GO:0001886 IEA endothelial cell morphogenesis
GO:0003421 IEA growth plate cartilage axis specification
GO:0005179 TAS hormone activity
GO:0005615 IDA extracellular space
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006874 TAS cellular calcium ion homeostasis
GO:0007566 IEA embryo implantation
GO:0010596 IEA negative regulation of endothelial cell migration
GO:0014070 IEA response to organic cyclic compound
GO:0016324 IEA apical plasma membrane
GO:0030320 TAS cellular monovalent inorganic anion homeostasis
GO:0030336 IEA negative regulation of cell migration
GO:0033280 IEA response to vitamin D
GO:0035988 IEA chondrocyte proliferation
GO:0044070 IEA regulation of anion transport
GO:0046697 IEA decidualization
GO:0051926 IEA negative regulation of calcium ion transport
GO:0060348 IEA bone development
GO:0071320 IEA cellular response to cAMP
GO:0071385 IEA cellular response to glucocorticoid stimulus
GO:0071456 IEA cellular response to hypoxia
GO:0086004 IEA regulation of cardiac muscle cell contraction
GO:0090280 IEA positive regulation of calcium ion import
GO:1903403 IEA negative regulation of renal phosphate excretion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000025008 stc1-001 protein_coding Danio_rerio 0 215
ENST00000290271 STC1-001 protein_coding Homo_sapiens 0 3729
ENST00000524323 STC1-002 protein_coding Homo_sapiens 0 1923

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