C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: procollagen C-endopeptidase enhancer 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000015498 Pcolce2-001 ENSMUSG00000015354 10090 + 9:95637601-95698096 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000015498
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000015498 1.821±0.60 0.361±0.09 1.614±0.50 0.240±0.20 2.555±0.80 0.393±0.09 1.288±0.24 0.492±0.13 0.432±0.45 24.295±1.17 0.717±0.19 0.342±0.11 0.105±0.08 0.111±0.05

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005518 ISO collagen binding
GO:0008201 ISO heparin binding
GO:0010952 IEA positive regulation of peptidase activity
GO:0016504 ISO peptidase activator activity
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295992 PCOLCE2-001 protein_coding Homo_sapiens 0 1275
ENST00000461818 PCOLCE2-002 processed_transcript Homo_sapiens 0 215
ENST00000470795 PCOLCE2-009 retained_intron Homo_sapiens 0 560
ENST00000480473 PCOLCE2-006 nonsense_mediated_decay Homo_sapiens 0 625
ENST00000483454 PCOLCE2-003 retained_intron Homo_sapiens 0 217
ENST00000483986 PCOLCE2-007 retained_intron Homo_sapiens 0 508
ENST00000485766 PCOLCE2-004 protein_coding Homo_sapiens 0 719
ENST00000493733 PCOLCE2-005 processed_transcript Homo_sapiens 9.80909e-45 183
ENST00000495732 PCOLCE2-008 processed_transcript Homo_sapiens 0 453

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