C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: activating transcription factor 6 beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000015605 Atf6b-001 ENSMUSG00000015461 10090 + 17:34647146-34655074 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000015605
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000015605 24.337±5.89 24.952±7.22 19.961±2.33 30.818±16.29 25.668±13.46 35.074±4.54 7.764±0.91 18.180±4.71 12.548±2.65 30.203±2.74 3.467±1.27 26.352±10.22 15.831±6.95 9.353±4.04

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000794 ISS condensed nuclear chromosome
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005769 ISS early endosome
GO:0005783 IEA endoplasmic reticulum
GO:0005815 ISS microtubule organizing center
GO:0006351 IEA transcription, DNA-templated
GO:0006986 IEA response to unfolded protein
GO:0007076 ISS mitotic chromosome condensation
GO:0012505 ISS endomembrane system
GO:0016021 IEA integral component of membrane
GO:0016363 ISS nuclear matrix
GO:0016458 ISS gene silencing
GO:0043565 IEA sequence-specific DNA binding
GO:0045014 ISS negative regulation of transcription by glucose
GO:0045892 ISS negative regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000293709 ATF6B-002 protein_coding Homo_sapiens 0 2250
ENST00000375201 ATF6B-001 protein_coding Homo_sapiens 0 2302
ENST00000375203 ATF6B-002 protein_coding Homo_sapiens 0 2250
ENST00000383156 ATF6B-001 protein_coding Homo_sapiens 0 2302
ENST00000424226 TNXB-004 protein_coding Homo_sapiens 0 289
ENST00000425571 ATF6B-002 protein_coding Homo_sapiens 0 2244
ENST00000427136 ATF6B-002 protein_coding Homo_sapiens 0 2244
ENST00000435768 ATF6B-001 protein_coding Homo_sapiens 0 2296
ENST00000439240 ATF6B-001 protein_coding Homo_sapiens 0 2296
ENST00000461317 ATF6B-006 retained_intron Homo_sapiens 0 444
ENST00000462947 ATF6B-007 retained_intron Homo_sapiens 0 398
ENST00000465333 ATF6B-007 retained_intron Homo_sapiens 0 398
ENST00000465605 ATF6B-006 retained_intron Homo_sapiens 0 444
ENST00000475705 ATF6B-007 retained_intron Homo_sapiens 0 398
ENST00000477445 ATF6B-007 retained_intron Homo_sapiens 0 398
ENST00000478957 TNXB-004 processed_transcript Homo_sapiens 0 289
ENST00000491968 ATF6B-006 retained_intron Homo_sapiens 0 444
ENST00000492342 ATF6B-006 retained_intron Homo_sapiens 0 444
ENST00000493830 TNXB-004 processed_transcript Homo_sapiens 0 289
ENST00000494022 ATF6B-009 processed_transcript Homo_sapiens 0 289

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