C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ARP8 actin-related protein 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000016115 Actr8-201 ENSMUSG00000015971 10090 + 14:29978337-29993221 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000016115
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000016115 7.093±1.98 2.579±1.58 12.434±1.41 15.268±1.96 3.254±1.27 3.004±1.33 4.528±1.57 7.018±2.12 6.970±3.13 5.235±1.45 10.880±0.65 10.126±7.50 12.330±2.74 10.234±3.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00002V CIL_00002V_0002 CGP 14:29968308-29993221

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0006281 IEA DNA repair
GO:0006310 IEA DNA recombination
GO:0006338 IEA chromatin remodeling
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007067 IEA mitotic nuclear division
GO:0008150 ND biological_process
GO:0031011 IEA Ino80 complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000335754 ACTR8-001 protein_coding Homo_sapiens 0 2335
ENST00000482349 ACTR8-003 protein_coding Homo_sapiens 0 2124
ENST00000486794 ACTR8-002 protein_coding Homo_sapiens 0 1020
ENST00000488802 ACTR8-005 processed_transcript Homo_sapiens 0 411
ENST00000495993 ACTR8-006 retained_intron Homo_sapiens 0 527
ENST00000498740 ACTR8-004 protein_coding Homo_sapiens 0 662

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