C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Friend leukemia integration 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000016231 Fli1-001 ENSMUSG00000016087 10090 - 9:32422204-32541595 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000016231
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000016231 11.594±3.86 2.586±1.46 3.153±0.10 1.078±0.59 15.058±4.45 1.761±0.57 7.026±1.09 3.885±0.93 2.008±1.00 10.686±0.96 1.693±0.34 4.839±2.72 1.082±0.62 0.181±0.11

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0000980 IDA RNA polymerase II distal enhancer sequence-specific DNA binding
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0001077 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003682 IDA chromatin binding
GO:0005634 IDA nucleus
GO:0006355 IMP regulation of transcription, DNA-templated
GO:0006357 IBA regulation of transcription from RNA polymerase II promoter
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0008015 IMP blood circulation
GO:0009887 IMP organ morphogenesis
GO:0009987 TAS cellular process
GO:0035855 IMP megakaryocyte development
GO:0043565 IDA sequence-specific DNA binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000281428 FLI1-201 protein_coding Homo_sapiens 0 1829
ENST00000326786 ETV3-001 protein_coding Homo_sapiens 0.000000000002 79
ENST00000344954 FLI1-202 protein_coding Homo_sapiens 0 1356
ENST00000368192 ETV3-002 protein_coding Homo_sapiens 0.000000000006 79
ENST00000429175 FLI1-002 nonsense_mediated_decay Homo_sapiens 0 1829
ENST00000454449 ETV3L-001 protein_coding Homo_sapiens 0.000000000002 79
ENST00000460850 ETV3-003 processed_transcript Homo_sapiens 0.0000000004 69
ENST00000527767 FLI1-008 protein_coding Homo_sapiens 0 555
ENST00000527786 FLI1-001 protein_coding Homo_sapiens 0 2717
ENST00000528790 FLI1-006 retained_intron Homo_sapiens 0 1190
ENST00000534087 FLI1-003 protein_coding Homo_sapiens 0 2134
ENST00000608055 FLI1-007 retained_intron Homo_sapiens 0 510
ENST00000608303 FLI1-004 nonsense_mediated_decay Homo_sapiens 0 1356

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