C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000019109 Ywhah-001 ENSMUSG00000018965 10090 + 5:33018816-33027966 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000019109
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000019109 69.801±13.25 150.748±18.07 94.668±10.76 194.171±58.18 52.303±21.22 131.789±20.25 39.155±3.36 43.601±3.94 60.535±44.58 97.991±16.60 12.865±1.73 124.265±40.71 70.850±51.92 19.115±6.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00032D CIL_00032D_0002 CGP 5:32863701-33027966
CIL_0006EV CIL_0006EV_0003 CGP 5:33018816-33162872

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002028 ISS regulation of sodium ion transport
GO:0003779 IDA actin binding
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005886 IEA plasma membrane
GO:0006713 ISS glucocorticoid catabolic process
GO:0006886 IDA intracellular protein transport
GO:0007010 NAS cytoskeleton organization
GO:0007088 NAS regulation of mitosis
GO:0014704 IC intercalated disc
GO:0017080 ISS sodium channel regulator activity
GO:0019899 IEA enzyme binding
GO:0019904 IDA protein domain specific binding
GO:0021762 IEA substantia nigra development
GO:0030659 TAS cytoplasmic vesicle membrane
GO:0035259 ISS glucocorticoid receptor binding
GO:0042921 ISS glucocorticoid receptor signaling pathway
GO:0043066 NAS negative regulation of apoptotic process
GO:0044325 IPI ion channel binding
GO:0045893 ISS positive regulation of transcription, DNA-templated
GO:0046982 IEA protein heterodimerization activity
GO:0050774 IDA negative regulation of dendrite morphogenesis
GO:0070062 IEA extracellular vesicular exosome
GO:0086010 ISS membrane depolarization during action potential
GO:2000649 ISS regulation of sodium ion transmembrane transporter activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000248975 YWHAH-001 protein_coding Homo_sapiens 0 1949
ENST00000397492 YWHAH-002 protein_coding Homo_sapiens 0 1663
ENST00000420430 YWHAH-004 protein_coding Homo_sapiens 0 612
ENST00000443669 YWHAH-005 nonsense_mediated_decay Homo_sapiens 0 503
ENST00000471374 YWHAH-003 processed_transcript Homo_sapiens 0 1661
ENST00000479649 YWHAH-006 processed_transcript Homo_sapiens 0 645

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