C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S6 kinase-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000019379 Rps6kl1-201 ENSMUSG00000019235 10090 - 12:85135596-85151264 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000019379
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000019379 1.206±0.47 0.712±0.18 0.141±0.00 11.091±1.22 0.908±0.15 0.378±0.08 1.555±0.15 0.418±0.05 0.398±0.29 0.495±0.10 0.343±0.07 0.478±0.16 0.754±0.45 0.028±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004K5 CIL_0004K5_0003 CGP 12:85110833-85151264
CIL_00084S CIL_00084S_0002 VISTA 12:85135374-85736988
CIL_0003TN CIL_0003TN_0002 CGP 12:85135596-85177296

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005524 IEA ATP binding
GO:0005575 ND cellular_component
GO:0005840 IEA ribosome
GO:0006468 IEA protein phosphorylation
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000354625 RPS6KL1-201 protein_coding Homo_sapiens 0 1308
ENST00000553646 RPS6KL1-006 retained_intron Homo_sapiens 0 313
ENST00000553789 RPS6KL1-012 protein_coding Homo_sapiens 0 411
ENST00000553894 RPS6KL1-003 retained_intron Homo_sapiens 0 702
ENST00000553971 RPS6KL1-013 protein_coding Homo_sapiens 0.000003 57
ENST00000554834 RPS6KL1-010 retained_intron Homo_sapiens 0 252
ENST00000554900 RPS6KL1-015 processed_transcript Homo_sapiens 0 446
ENST00000555009 RPS6KL1-001 nonsense_mediated_decay Homo_sapiens 0 819
ENST00000555647 RPS6KL1-002 protein_coding Homo_sapiens 0 1306
ENST00000555834 RPS6KL1-004 retained_intron Homo_sapiens 0 917
ENST00000556848 RPS6KL1-008 protein_coding Homo_sapiens 0 278
ENST00000557383 RPS6KL1-011 retained_intron Homo_sapiens 0 364
ENST00000557413 RPS6KL1-005 protein_coding Homo_sapiens 0 1308

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