C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calmodulin 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000019514 Calm3-001 ENSMUSG00000019370 10090 - 7:16915379-16924114 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000019514
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000019514 112.769±21.66 109.331±13.16 102.889±3.09 250.183±23.62 72.857±28.58 180.093±30.79 66.467±4.77 132.293±7.66 50.150±26.49 109.507±6.41 176.679±5.65 126.325±33.09 86.574±53.98 105.177±52.32

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000922 IEA spindle pole
GO:0002027 IEA regulation of heart rate
GO:0005509 IEA calcium ion binding
GO:0005513 IEA detection of calcium ion
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005813 IEA centrosome
GO:0005829 TAS cytosol
GO:0005876 IEA spindle microtubule
GO:0010880 IEA regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum
GO:0019901 IEA protein kinase binding
GO:0019904 IEA protein domain specific binding
GO:0021762 IEA substantia nigra development
GO:0030017 IEA sarcomere
GO:0030801 IEA positive regulation of cyclic nucleotide metabolic process
GO:0031432 IEA titin binding
GO:0031982 IEA vesicle
GO:0031996 IEA thioesterase binding
GO:0031997 IEA N-terminal myristoylation domain binding
GO:0032465 IEA regulation of cytokinesis
GO:0032516 IEA positive regulation of phosphoprotein phosphatase activity
GO:0034704 IEA calcium channel complex
GO:0035307 IEA positive regulation of protein dephosphorylation
GO:0043274 IEA phospholipase binding
GO:0044325 IEA ion channel binding
GO:0051343 IEA positive regulation of cyclic-nucleotide phosphodiesterase activity
GO:0051592 IEA response to calcium ion
GO:0055117 IEA regulation of cardiac muscle contraction
GO:0060316 IEA positive regulation of ryanodine-sensitive calcium-release channel activity
GO:0070062 IEA extracellular vesicular exosome
GO:0072542 IEA protein phosphatase activator activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000065392 calm1a-201 protein_coding Danio_rerio 0 396
ENST00000291295 CALM3-001 protein_coding Homo_sapiens 0 1336
ENST00000391918 CALM3-009 protein_coding Homo_sapiens 0 821
ENST00000477244 CALM3-005 processed_transcript Homo_sapiens 0 922
ENST00000482455 CALM3-004 processed_transcript Homo_sapiens 0 721
ENST00000486500 CALM3-002 retained_intron Homo_sapiens 0 662
ENST00000594523 CALM3-015 protein_coding Homo_sapiens 0 710
ENST00000595072 CALM3-012 retained_intron Homo_sapiens 0 660
ENST00000596362 CALM3-003 protein_coding Homo_sapiens 0 1068
ENST00000597743 CALM3-013 protein_coding Homo_sapiens 0 453
ENST00000597868 CALM3-011 retained_intron Homo_sapiens 0 490
ENST00000598871 CALM3-014 protein_coding Homo_sapiens 0 630
ENST00000599839 CALM3-007 protein_coding Homo_sapiens 0 1064
ENST00000602169 CALM3-010 retained_intron Homo_sapiens 4e-30 135

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