C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GIPC PDZ domain containing family, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000019577 Gipc1-201 ENSMUSG00000019433 10090 + 8:83652678-83664788 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000019577
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000019577 20.006±2.06 19.128±2.49 46.306±6.03 37.258±7.44 16.991±6.76 40.644±3.45 10.492±1.51 24.536±3.54 14.568±8.54 26.277±2.18 10.245±0.62 24.917±4.21 43.642±12.20 5.233±0.77

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IPI actin binding
GO:0005096 TAS GTPase activator activity
GO:0005102 IEA receptor binding
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005829 IDA cytosol
GO:0005903 IEA brush border
GO:0005938 IEA cell cortex
GO:0006605 IPI protein targeting
GO:0007186 TAS G-protein coupled receptor signaling pathway
GO:0007268 IMP synaptic transmission
GO:0008021 IDA synaptic vesicle
GO:0012506 IDA vesicle membrane
GO:0014047 IMP glutamate secretion
GO:0016020 IDA membrane
GO:0016023 IEA cytoplasmic membrane-bounded vesicle
GO:0017022 IPI myosin binding
GO:0030139 IEA endocytic vesicle
GO:0030165 IEA PDZ domain binding
GO:0030511 IDA positive regulation of transforming growth factor beta receptor signaling pathway
GO:0031647 IDA regulation of protein stability
GO:0032435 IDA negative regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0032467 IEA positive regulation of cytokinesis
GO:0042803 IPI protein homodimerization activity
GO:0043197 IDA dendritic spine
GO:0043198 IDA dendritic shaft
GO:0043542 IMP endothelial cell migration
GO:0043547 TAS positive regulation of GTPase activity
GO:0048167 IMP regulation of synaptic plasticity
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000345425 GIPC1-007 protein_coding Homo_sapiens 0 1218
ENST00000393028 GIPC1-201 protein_coding Homo_sapiens 0 928
ENST00000393033 GIPC1-001 protein_coding Homo_sapiens 0 1218
ENST00000585606 GIPC1-002 retained_intron Homo_sapiens 0 448
ENST00000586027 GIPC1-005 protein_coding Homo_sapiens 0 1218
ENST00000587210 GIPC1-008 protein_coding Homo_sapiens 0 641
ENST00000589497 GIPC1-010 nonsense_mediated_decay Homo_sapiens 0 448
ENST00000589631 GIPC1-012 protein_coding Homo_sapiens 0 448
ENST00000591349 GIPC1-006 protein_coding Homo_sapiens 0 928

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